Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_10655 | Not Available | Positive | 2382061 - 2382684 | 22857.3 |
| transposase | AFK24_10660 | Not Available | Negative | 2382835 - 2383328 | 17878.9 |
| ligand-gated channel | AFK24_10665 | Not Available | Negative | 2383463 - 2385964 | 90064.4 |
| ribosomal subunit interface protein | AFK24_10670 | Not Available | Positive | 2386215 - 2386643 | 16071.8 |
| iron dicitrate transport regulator fecr | AFK24_10675 | Not Available | Negative | 2386733 - 2387695 | 35167.6 |
| rna polymerase sigma factor | AFK24_10680 | Not Available | Negative | 2387692 - 2388237 | 20276.5 |
| hypothetical protein | AFK24_10685 | Not Available | Positive | 2388403 - 2388735 | 12189.7 |
| psie family protein | AFK24_10690 | Not Available | Negative | 2388855 - 2389304 | 16456.4 |
| hypothetical protein | AFK24_10695 | Not Available | Positive | 2389576 - 2389839 | 9706.6 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | AFK24_10700 | Not Available | Negative | 2390015 - 2391118 | 39103.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









