Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | AFK24_10445 | Not Available | Positive | 2328731 - 2331466 | 99570.7 |
| membrane protein | AFK24_10450 | Not Available | Positive | 2331468 - 2332583 | 40772.6 |
| phosphoketolase | AFK24_10455 | Not Available | Positive | 2332829 - 2335216 | 88394.6 |
| alpha-glucan phosphorylase | AFK24_10460 | Not Available | Positive | 2335232 - 2337745 | 93972.7 |
| alpha/beta hydrolase | AFK24_10465 | Not Available | Positive | 2337900 - 2338907 | 36741.3 |
| acetate kinase | AFK24_10470 | Not Available | Negative | 2339040 - 2340242 | 42938.9 |
| bifunctional enoyl-coa hydratase/phosphate acetyltransferase | AFK24_10475 | Not Available | Negative | 2340239 - 2341666 | 50140.7 |
| transporter | AFK24_10480 | Not Available | Negative | 2341710 - 2342945 | 43298.1 |
| porin | AFK24_10485 | Not Available | Negative | 2343102 - 2344331 | 45144.7 |
| c4-dicarboxylate transporter | AFK24_10490 | Not Available | Negative | 2344423 - 2345736 | 46177.4 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









