Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter substrate-binding protein | AFK24_10295 | Not Available | Positive | 2298782 - 2299654 | 31899.3 |
| chemotaxis protein | AFK24_10300 | Not Available | Positive | 2299935 - 2301248 | 47938.8 |
| hypothetical protein | AFK24_10305 | Not Available | Positive | 2301509 - 2302960 | 54551.4 |
| sam-dependent methyltransferase | AFK24_10310 | Not Available | Positive | 2303026 - 2303937 | 32851.1 |
| hypothetical protein | AFK24_10315 | Not Available | Negative | 2303997 - 2304689 | 25465.8 |
| hypothetical protein | AFK24_10320 | Not Available | Positive | 2304949 - 2305326 | 14086.9 |
| glutamine amidotransferase | AFK24_10325 | Not Available | Negative | 2305849 - 2306412 | 19886.5 |
| hypothetical protein | AFK24_10330 | Not Available | Negative | 2306520 - 2306738 | 7654.12 |
| glutaminase | AFK24_10335 | Not Available | Positive | 2306908 - 2307816 | 32943.1 |
| lipoprotein | AFK24_10340 | Not Available | Positive | 2308003 - 2309082 | 39143.0 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









