Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide methionine sulfoxide reductase | AFK24_09150 | Not Available | Negative | 2062407 - 2062802 | 14665.4 |
| aminotransferase | AFK24_09155 | Not Available | Positive | 2062997 - 2064208 | 44847.3 |
| protease htpx | AFK24_09160 | Not Available | Positive | 2064482 - 2065369 | 32211.6 |
| thiopurine s-methyltransferase | AFK24_09165 | Not Available | Negative | 2065431 - 2066087 | 24543.1 |
| aromatic ring-opening dioxygenase ligb | AFK24_09170 | Not Available | Positive | 2066189 - 2066956 | 27511.9 |
| rna helicase | AFK24_09175 | Not Available | Negative | 2067680 - 2069359 | 60984.9 |
| spermidine synthase | AFK24_09180 | Not Available | Negative | 2069818 - 2070573 | 28282.0 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | AFK24_09185 | Not Available | Positive | 2070816 - 2072162 | 49996.4 |
| cytoplasmic protein | AFK24_09190 | Not Available | Negative | 2072259 - 2073476 | 45787.0 |
| hypothetical protein | AFK24_09195 | Not Available | Negative | 2073525 - 2073761 | 9367.29 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









