Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | AFK24_08945 | Not Available | Positive | 2022542 - 2023636 | 42158.6 |
| arac family transcriptional regulator | AFK24_08950 | Not Available | Negative | 2023788 - 2024783 | 37733.9 |
| acyl-coa dehydrogenase | AFK24_08955 | Not Available | Positive | 2024926 - 2026062 | 41912.5 |
| aldo/keto reductase | AFK24_08960 | Not Available | Negative | 2026191 - 2027228 | 38506.5 |
| 50s ribosomal protein l13 | AFK24_08965 | Not Available | Positive | 2027475 - 2027903 | 15897.2 |
| 30s ribosomal protein s9 | AFK24_08970 | Not Available | Positive | 2027918 - 2028310 | 14628.8 |
| ubiquinol-cytochrome c reductase | AFK24_08975 | Not Available | Positive | 2028580 - 2029173 | 20888.2 |
| cytochrome b | AFK24_08980 | Not Available | Positive | 2029173 - 2030384 | 45830.9 |
| cytochrome c | AFK24_08985 | Not Available | Positive | 2030384 - 2031166 | 29141.2 |
| stringent starvation protein a | AFK24_08990 | Not Available | Positive | 2031398 - 2032015 | 23321.3 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









