Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter permease | AFK24_08845 | Not Available | Negative | 2004110 - 2004682 | 21178.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | AFK24_08850 | Not Available | Negative | 2004692 - 2005216 | 18784.6 |
| d-arabinose 5-phosphate isomerase | AFK24_08855 | Not Available | Negative | 2005231 - 2006205 | 34541.2 |
| abc transporter atp-binding protein | AFK24_08860 | Not Available | Positive | 2006497 - 2007306 | 29441.9 |
| abc transporter permease | AFK24_08865 | Not Available | Positive | 2007306 - 2008103 | 28316.2 |
| organic solvent abc transporter substrate-binding protein | AFK24_08870 | Not Available | Positive | 2008103 - 2008570 | 16302.9 |
| toluene tolerance protein | AFK24_08875 | Not Available | Positive | 2008582 - 2009235 | 23851.4 |
| anti-sigma factor antagonist | AFK24_08880 | Not Available | Positive | 2009232 - 2009537 | 10668.0 |
| bola family transcriptional regulator | AFK24_08885 | Not Available | Positive | 2009653 - 2009892 | 8930.69 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | AFK24_08890 | Not Available | Positive | 2009915 - 2011180 | 44957.1 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









