Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | AFK24_08690 | Not Available | Positive | 1973064 - 1974629 | 58352.9 |
| malate transporter | AFK24_08695 | Not Available | Positive | 1974826 - 1975767 | 33531.0 |
| conjugal transfer protein trar | AFK24_08700 | Not Available | Negative | 1975771 - 1976823 | 36911.8 |
| lipoprotein | AFK24_08705 | Not Available | Negative | 1976868 - 1977236 | 13093.6 |
| glutamyl-trna amidotransferase | AFK24_08710 | Not Available | Negative | 1977345 - 1978808 | 53624.3 |
| glutamyl-trna amidotransferase | AFK24_08715 | Not Available | Negative | 1978821 - 1980272 | 51984.9 |
| glutamyl-trna amidotransferase | AFK24_08720 | Not Available | Negative | 1980288 - 1980575 | 10534.5 |
| rod shape-determining protein mreb | AFK24_08725 | Not Available | Positive | 1980784 - 1981821 | 37035.9 |
| rod shape-determining protein mrec | AFK24_08730 | Not Available | Positive | 1982038 - 1983168 | 39441.6 |
| rod shape-determining protein mred | AFK24_08735 | Not Available | Positive | 1983161 - 1983652 | 18502.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









