Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFK24_08285 | Not Available | Negative | 1887920 - 1888429 | 18593.8 |
| tryptophan synthase subunit alpha | AFK24_08290 | Not Available | Negative | 1888553 - 1889365 | 28389.1 |
| tryptophan synthase subunit beta | AFK24_08295 | Not Available | Negative | 1889362 - 1890591 | 44441.2 |
| lysr family transcriptional regulator | AFK24_08300 | Not Available | Positive | 1890715 - 1891617 | 32876.5 |
| hypothetical protein | AFK24_08305 | Not Available | Negative | 1891625 - 1891951 | 11631.7 |
| dodecin flavoprotein | AFK24_08310 | Not Available | Positive | 1892118 - 1892333 | 7951.41 |
| hypothetical protein | AFK24_08315 | Not Available | Positive | 1892475 - 1892699 | 7644.35 |
| hypothetical protein | AFK24_08320 | Not Available | Negative | 1892823 - 1893824 | 36383.7 |
| peroxiredoxin osmc | AFK24_08325 | Not Available | Positive | 1894060 - 1894491 | 14823.7 |
| hypothetical protein | AFK24_08330 | Not Available | Negative | 1894545 - 1895150 | 22685.5 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









