Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine acetyltransferase | AFK24_07465 | Not Available | Negative | 1690477 - 1691694 | 42234.7 |
| preprotein translocase subunit seca | AFK24_07470 | Not Available | Negative | 1691812 - 1694550 | 103270.0 |
| zn-ribbon-containing, putative rna-binding protein | AFK24_07475 | Not Available | Positive | 1694859 - 1695314 | 16815.5 |
| cyclic peptide transporter | AFK24_07480 | Not Available | Negative | 1695505 - 1697154 | 60301.8 |
| chromophore maturation protein pvdo | AFK24_07485 | Not Available | Negative | 1697398 - 1698276 | 32055.8 |
| peptidase m19 | AFK24_07490 | Not Available | Negative | 1698307 - 1699635 | 48669.1 |
| pvdj/pvdd/pvdp-like protein | AFK24_07495 | Not Available | Positive | 1699934 - 1701559 | 61579.6 |
| hypothetical protein | AFK24_07500 | Not Available | Positive | 1701645 - 1701863 | 7853.38 |
| rnd transporter | AFK24_07505 | Not Available | Negative | 1702152 - 1703543 | 50556.6 |
| macrolide abc transporter atp-binding protein | AFK24_07510 | Not Available | Negative | 1703551 - 1705530 | 69497.2 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









