Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | AFK24_07305 | Not Available | Negative | 1651708 - 1652934 | 43953.0 |
| aldehyde dehydrogenase | AFK24_07310 | Not Available | Negative | 1652946 - 1655141 | 78452.3 |
| (2fe-2s)-binding protein | AFK24_07315 | Not Available | Negative | 1655153 - 1655605 | 15910.4 |
| xylose isomerase | AFK24_07320 | Not Available | Positive | 1656356 - 1657207 | 32550.5 |
| 2og-fe(ii) oxygenase | AFK24_07325 | Not Available | Positive | 1657223 - 1658284 | 39202.4 |
| amino acid abc transporter substrate-binding protein | AFK24_07330 | Not Available | Positive | 1658370 - 1659173 | 28924.8 |
| amino acid abc transporter atpase | AFK24_07335 | Not Available | Positive | 1659337 - 1660848 | 55757.4 |
| exodeoxyribonuclease v subunit alpha | AFK24_07340 | Not Available | Negative | 1660984 - 1663083 | 76356.8 |
| exodeoxyribonuclease v subunit beta | AFK24_07345 | Not Available | Negative | 1663080 - 1666787 | 138164.0 |
| exodeoxyribonuclease v subunit gamma | AFK24_07350 | Not Available | Negative | 1666784 - 1670269 | 130510.0 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









