Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | GR12-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1359577 bp
Thymine Count
1374865 bp
Guanine Count
1943739 bp
Cytosine Count
1923132 bp
Genome Length
6601350 bp
Protein-coding Genes
5666 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein lppl | AFK24_06795 | Not Available | Positive | 1533556 - 1533702 | 5091.22 |
| diaminopimelate decarboxylase | AFK24_06800 | Not Available | Positive | 1533712 - 1534959 | 45245.0 |
| diaminopimelate epimerase | AFK24_06805 | Not Available | Positive | 1534963 - 1535793 | 30401.6 |
| hypothetical protein | AFK24_06810 | Not Available | Positive | 1535807 - 1536541 | 27215.7 |
| recombinase xerc | AFK24_06815 | Not Available | Positive | 1536541 - 1537440 | 33968.6 |
| had family hydrolase | AFK24_06820 | Not Available | Positive | 1537433 - 1538125 | 25463.4 |
| hypothetical protein | AFK24_06825 | Not Available | Negative | 1538284 - 1538610 | 11483.0 |
| hypothetical protein | AFK24_06830 | Not Available | Negative | 1538712 - 1539137 | 15648.7 |
| ammonia channel protein | AFK24_06835 | Not Available | Negative | 1539296 - 1540633 | 45939.1 |
| nitrogen regulatory protein p-ii 1 | AFK24_06840 | Not Available | Negative | 1540667 - 1541005 | 12330.9 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









