Pseudomonas syringae str. CEB003

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae str. CEB003 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. As a heterotrophic organism, it utilizes organic compounds as its energy source and thrives in aerobic environments, indicating a requirement for oxygen in its metabolic processes. This strain has been identified in multiple habitats, suggesting a broad ecological versatility that allows it to adapt to various environmental conditions. The ability of Pseudomonas syringae str. CEB003 to occupy diverse habitats may be linked to its metabolic flexibility and potential interactions with organic substrates. This adaptability highlights the ecological significance of the strain within microbial communities, where it may play a role in nutrient cycling and the decomposition of organic matter. Understanding these traits can shed light on the ecological dynamics of Pseudomonas species and their contributions to ecosystem functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainCEB003

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae str. CEB003
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain CEB003 contig188.1, whole genome

Gene Summary

Adenine Count

1387512 bp

Thymine Count

1392700 bp

Guanine Count

1956425 bp

Cytosine Count

1944648 bp

Genome Length

6681285 bp

Protein-coding Genes

5717 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fatty acid desaturaseIV02_01425Not AvailableNegative275907 - 27692638979.0
hypothetical proteinIV02_01435Not AvailableNegative277576 - 27786310939.9
ligand-gated channelIV02_01440Not AvailableNegative278075 - 28018977392.0
lysr family transcriptional regulatorIV02_01445Not AvailablePositive280404 - 28128832051.9
dehydrogenaseIV02_01450Not AvailableNegative281428 - 28228530567.5
nitrate abc transporter substrate-binding proteinIV02_01455Not AvailableNegative282485 - 28352237740.0
monooxygenaseIV02_01460Not AvailablePositive283863 - 28523350801.5
dihydrofolate reductaseIV02_01465Not AvailablePositive285286 - 28623634166.8
alkyl hydroperoxide reductaseIV02_01470Not AvailableNegative286433 - 28711624748.4
tonb-dependent receptorIV02_01475Not AvailableNegative287132 - 28961889794.4

Displaying genes 351 – 360 of 5847 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819
Cherry cankerCausesPMC9305585

Displaying health effects 1 – 8 of 8 in total