Pseudomonas syringae str. Ps25

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae strain Ps25 is a Gram-negative, rod-shaped bacterium that exists as single cells and exhibits heterotrophic metabolic capabilities. This microbe is classified as an aerobe, necessitating oxygen for its growth and energy production. Pseudomonas syringae strains, including Ps25, are known to inhabit diverse environments, suggesting a broad ecological adaptability. The rod shape of Pseudomonas syringae str. Ps25 is characteristic of many members of the Pseudomonas genus, which is often associated with various environmental niches, including soil and plant surfaces. As a heterotroph, Ps25 likely utilizes organic compounds from its surroundings to fulfill its nutritional requirements, which may contribute to its ability to thrive in multiple habitats. The aerobic nature of this strain implies that it plays a role in aerobic biogeochemical cycles, particularly in environments rich in organic matter where oxygen is available. This trait may facilitate interactions with other microorganisms, contributing to complex microbial communities. Furthermore, the metabolic versatility of Pseudomonas syringae str. Ps25 could make it an important player in the decomposition of organic materials and nutrient cycling within its habitats. Thus, understanding this strain's ecological role may provide insights into microbial dynamics in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainPs25

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae str. Ps25
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae strain Ps25 plasmid pPs253.

Gene Summary

Adenine Count

28619 bp

Thymine Count

28832 bp

Guanine Count

34996 bp

Cytosine Count

35889 bp

Genome Length

128340 bp

Protein-coding Genes

135 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heavy metal response regulator transcription factorEIZ61_RS26550Not AvailablePositive5457389 - 545806625203.6
heavy metal sensor histidine kinaseEIZ61_RS26555Not AvailablePositive5458056 - 545942050275.5
sensor domain-containing diguanylate cyclaseEIZ61_RS26560Not AvailablePositive5459624 - 546113255964.8
pa2169 family four-helix-bundle proteinEIZ61_RS26565Not AvailableNegative5461227 - 546170317129.1
duf3820 family proteinEIZ61_RS26570Not AvailablePositive5461923 - 54621629051.09
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseEIZ61_RS26575Not AvailableNegative5462293 - 546296723878.1
6-phosphogluconolactonaseEIZ61_RS26580Not AvailableNegative5462994 - 546370725048.1
glucose-6-phosphate dehydrogenaseEIZ61_RS26585Not AvailableNegative5463694 - 546516355471.3
murr/rpir family transcriptional regulatorEIZ61_RS26590Not AvailablePositive5465382 - 546624831366.9
d-hexose-6-phosphate mutarotaseEIZ61_RS26600Not AvailableNegative5466663 - 546753832815.4

Displaying genes 5351 – 5360 of 6068 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC3202874
NecrosisCausesPMC3202874
Foliar necroses and cankersCausesPMC6638699
Bacterial cankerCausesPMC8815115
BlightCausesPMC12030312
Plant diseasesCausesPMC3029378
Bacterial cankerCausesPMC4803819
Cherry cankerCausesPMC9305585

Displaying health effects 1 – 8 of 8 in total