Stutzerimonas decontaminans

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Stutzerimonas

Description

Stutzerimonas decontaminans is a Gram-negative, rod-shaped bacterium that typically exists as single cells and relies on heterotrophic metabolism for energy. As an aerobic organism, S. decontaminans requires oxygen for its growth and survival, positioning it within environments that support such conditions. Its classification as host-associated suggests a potential niche within the microbiomes of various organisms, where it may play a role in bioremediation or decontamination processes. The ability of S. decontaminans to thrive in association with hosts indicates its potential utility in managing organic pollutants or toxins, possibly through the degradation of harmful substances. This capacity highlights the significance of such microbes in environmental microbiology, particularly in understanding how host-associated bacteria can contribute to ecosystem health and stability. Further research into the specific interactions and metabolic pathways of S. decontaminans could provide insights into its ecological roles and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusStutzerimonas
SpeciesStutzerimonas decontaminans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Stutzerimonas decontaminans
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae, Citrus, Serpentes
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Stutzerimonas decontaminans strain 19SMN4 plasmid pLIB119,

Gene Summary

Adenine Count

22610 bp

Thymine Count

22491 bp

Guanine Count

31222 bp

Cytosine Count

31410 bp

Genome Length

107733 bp

Protein-coding Genes

140 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2fe-2s iron-sulfur cluster-binding proteinUIB01_RS22135Not AvailablePositive50930 - 5191635689.2
naphthalene 1,2-dioxygenase system ferredoxin ndoaUIB01_RS22140Not AvailablePositive52060 - 5237411490.8
aromatic ring-hydroxylating dioxygenase subunit alphaUIB01_RS23000Not AvailablePositive52444 - 5379349683.2
aromatic-ring-hydroxylating dioxygenase subunit betaUIB01_RS22155Not AvailablePositive53809 - 5439022968.2
3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenaseUIB01_RS22160Not AvailablePositive54460 - 5523927426.0
aldehyde dehydrogenaseUIB01_RS22165Not AvailablePositive55287 - 5673852016.3
1,2-dihydroxynaphthalene dioxygenaseUIB01_RS22170Not AvailablePositive56766 - 5767433922.4
dihydrodipicolinate synthase family proteinUIB01_RS22175Not AvailablePositive58081 - 5908536951.3
2-hydroxychromene-2-carboxylate isomeraseUIB01_RS22180Not AvailablePositive59344 - 6001224516.9
alcohol dehydrogenase catalytic domain-containing proteinUIB01_RS23620Not AvailablePositive60097 - 602013711.58

Displaying genes 71 – 80 of 140 in total

Metabolites

1716 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1716 metabolites

Health Effects

No health effects information available for this bacterium.