Pseudomonas sp.

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. is a Gram-negative, rod-shaped bacterium that thrives in diverse environments, including dental plaque, fresh and marine waters, and various soil habitats, such as the rhizosphere of common reeds and the phyllosphere. This microorganism exhibits an aerobic metabolism, necessitating oxygen for growth and survival. Pseudomonas species are well-known for their metabolic versatility, enabling them to inhabit a wide range of ecological niches, from the surface of the tongue to nasal discharge. This adaptability suggests a potential role in nutrient cycling and biodegradation in their respective environments. For instance, their presence in dental plaque indicates a role in oral microbiology, while their occurrence in the rhizosphere highlights their potential contributions to plant health and soil ecology. The ability of Pseudomonas sp. to inhabit both aquatic and terrestrial ecosystems underscores its ecological significance. Its prevalence in diverse habitats may facilitate interactions with a variety of organisms, further emphasizing its role in maintaining microbial diversity and ecosystem function. Understanding the specific interactions and contributions of Pseudomonas sp. in these environments can provide valuable insights into microbial ecology and the dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature40
Temperature rangeNot Available
Habitatdental plaque; Fresh water; Marine; nasal discharge; phyllosphere; rhizosphere; rhizosphere of common reeds; soils; tongue surface
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Gene Summary

Adenine Count

1027225 bp

Thymine Count

1024323 bp

Guanine Count

1432294 bp

Cytosine Count

1443980 bp

Genome Length

4930365 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s3PUP74_28510Q4K539Negative6290130 - 629081625693.4
50s ribosomal protein l22PUP74_28515A6UZJ3Negative6290830 - 629116211911.6
30s ribosomal protein s19PUP74_28520Q48D40Negative6291176 - 629145110334.9
50s ribosomal protein l2PUP74_28525Q4K536Negative6291468 - 629229229665.0
50s ribosomal protein l23PUP74_28530Q4K535Negative6292307 - 629260610945.3
50s ribosomal protein l4PUP74_28535Q4K534Negative6292603 - 629320521950.4
50s ribosomal protein l3PUP74_28540Q4K533Negative6293218 - 629385322547.0
30s ribosomal protein s10PUP74_28545Q4K532Negative6293934 - 629424511753.3
elongation factor tuPUP74_28550Q4K519Negative6294386 - 629557943687.5
elongation factor gPUP74_28555Q4K530Negative6295610 - 629773977951.2

Displaying genes 42831 – 42840 of 43269 in total

Metabolites

54 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da

Displaying 1–10 of 54 metabolites

Health Effects

No health effects information available for this bacterium.