Pseudomonas sp.

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. is a Gram-negative, rod-shaped bacterium that thrives in diverse environments, including dental plaque, fresh and marine waters, and various soil habitats, such as the rhizosphere of common reeds and the phyllosphere. This microorganism exhibits an aerobic metabolism, necessitating oxygen for growth and survival. Pseudomonas species are well-known for their metabolic versatility, enabling them to inhabit a wide range of ecological niches, from the surface of the tongue to nasal discharge. This adaptability suggests a potential role in nutrient cycling and biodegradation in their respective environments. For instance, their presence in dental plaque indicates a role in oral microbiology, while their occurrence in the rhizosphere highlights their potential contributions to plant health and soil ecology. The ability of Pseudomonas sp. to inhabit both aquatic and terrestrial ecosystems underscores its ecological significance. Its prevalence in diverse habitats may facilitate interactions with a variety of organisms, further emphasizing its role in maintaining microbial diversity and ecosystem function. Understanding the specific interactions and contributions of Pseudomonas sp. in these environments can provide valuable insights into microbial ecology and the dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature40
Temperature rangeNot Available
Habitatdental plaque; Fresh water; Marine; nasal discharge; phyllosphere; rhizosphere; rhizosphere of common reeds; soils; tongue surface
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Gene Summary

Adenine Count

1027225 bp

Thymine Count

1024323 bp

Guanine Count

1432294 bp

Cytosine Count

1443980 bp

Genome Length

4930365 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf58 domain-containing proteinPUP74_24860P94475Positive5530483 - 553181450084.6
pilz domain-containing proteinPUP74_24865Not AvailableNegative5531818 - 553217713848.7
tetratricopeptide repeat proteinPUP74_24870Not AvailableNegative5532330 - 553270414267.0
pyruvate kinasePUP74_24875P21599Positive5532862 - 553431352129.9
enoyl-coa hydratase-related proteinPUP74_24880O75521Negative5534509 - 553525826946.8
iron-sulfur-binding ferredoxin reductasePUP74_24885Q3C1E0Negative5535288 - 553622634113.8
ggdef domain-containing proteinPUP74_24890Q8X8Q3Negative5536219 - 553732541493.9
fumarate hydratasePUP74_24895P40720Positive5537685 - 553920854735.4
atp-binding proteinPUP74_24900Q9HU20Positive5539355 - 554112165697.8
sigma-54 dependent transcriptional regulatorPUP74_24905Q9HU19Positive5541115 - 554244949479.6

Displaying genes 42101 – 42110 of 43269 in total

Metabolites

54 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da

Displaying 1–10 of 54 metabolites

Health Effects

No health effects information available for this bacterium.