Pseudomonas putida

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida is a Gram-negative, rod-shaped bacterium that is motile due to the presence of true flagella. This organism is characterized by its single-cell arrangement and is known for its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. Pseudomonas putida is a heterotrophic microbe that primarily derives its energy from organic compounds, making it well-suited for its natural habitats, which include soil and wastewater. As a mesophilic organism, Pseudomonas putida grows optimally at moderate temperatures. It is nonsporulating and possesses two cellular membranes, a trait typical of Gram-negative bacteria. The genome of Pseudomonas putida is complex, comprising seven replicons, which highlights its genetic diversity and adaptability. In terms of biotic relationships, Pseudomonas putida is free-living and does not exhibit pathogenicity towards animals, indicating it does not cause disease in this context. This microbe has garnered interest for its potential applications in bioremediation, given its ability to metabolize a variety of organic pollutants in contaminated environments. The ecological role of Pseudomonas putida in soil and wastewater systems is significant, as it contributes to nutrient cycling and the degradation of harmful substances, thus playing a vital part in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4950 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorDI560_12510Not AvailablePositive2792441 - 279378749582.2
pas domain-containing sensor histidine kinaseDI560_12515Not AvailablePositive2793784 - 279556265855.7
cyclic diguanylate phosphodiesteraseDI560_12520Not AvailableNegative2795584 - 279720359391.2
n-acetylmuramoyl-l-alanine amidaseDI560_12525Not AvailableNegative2797291 - 279807929335.0
ggdef domain-containing proteinDI560_12530Not AvailableNegative2798133 - 280006470874.0
endonucleaseDI560_12535Not AvailableNegative2800162 - 280101631981.6
thiol:disulfide interchange protein dsba/dsblDI560_12540Not AvailableNegative2801029 - 280166423074.8
cytochrome c4DI560_12545Not AvailableNegative2801818 - 280243521398.4
yiha family ribosome biogenesis gtp-binding proteinDI560_12555Not AvailablePositive2802908 - 280354023310.4
dna polymerase iDI560_12560Not AvailableNegative2803867 - 280661499832.7

Displaying genes 2471 – 2480 of 32944 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total