Pseudomonas putida

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida is a Gram-negative, rod-shaped bacterium that is motile due to the presence of true flagella. This organism is characterized by its single-cell arrangement and is known for its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. Pseudomonas putida is a heterotrophic microbe that primarily derives its energy from organic compounds, making it well-suited for its natural habitats, which include soil and wastewater. As a mesophilic organism, Pseudomonas putida grows optimally at moderate temperatures. It is nonsporulating and possesses two cellular membranes, a trait typical of Gram-negative bacteria. The genome of Pseudomonas putida is complex, comprising seven replicons, which highlights its genetic diversity and adaptability. In terms of biotic relationships, Pseudomonas putida is free-living and does not exhibit pathogenicity towards animals, indicating it does not cause disease in this context. This microbe has garnered interest for its potential applications in bioremediation, given its ability to metabolize a variety of organic pollutants in contaminated environments. The ecological role of Pseudomonas putida in soil and wastewater systems is significant, as it contributes to nutrient cycling and the degradation of harmful substances, thus playing a vital part in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4950 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine/lysine/arginine/ornithine abc transporter atp-binding proteinDI560_11945Not AvailableNegative2671442 - 267223329115.2
abc transporter permeaseDI560_11950Not AvailableNegative2672251 - 267298827228.0
abc transporter permeaseDI560_11955Not AvailableNegative2673005 - 267372726107.7
atp-dependent helicase hrpbDI560_11965Not AvailableNegative2674655 - 267717792906.6
polyribonucleotide nucleotidyltransferaseDI560_11970Not AvailablePositive2677294 - 267771314869.3
divalent metal cation transporter fiefDI560_11975Not AvailablePositive2677738 - 267860731017.1
hypothetical proteinDI560_11980Not AvailableNegative2678618 - 267945730756.4
lrp/asnc family transcriptional regulatorDI560_11985Not AvailablePositive2679775 - 268025117872.7
duf2788 domain-containing proteinDI560_11990Not AvailablePositive2680306 - 26805097413.63
pseudouridine synthaseDI560_11995Not AvailableNegative2680673 - 268132324441.4

Displaying genes 2361 – 2370 of 32944 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total