Pseudomonas putida

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida is a Gram-negative, rod-shaped bacterium that is motile due to the presence of true flagella. This organism is characterized by its single-cell arrangement and is known for its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. Pseudomonas putida is a heterotrophic microbe that primarily derives its energy from organic compounds, making it well-suited for its natural habitats, which include soil and wastewater. As a mesophilic organism, Pseudomonas putida grows optimally at moderate temperatures. It is nonsporulating and possesses two cellular membranes, a trait typical of Gram-negative bacteria. The genome of Pseudomonas putida is complex, comprising seven replicons, which highlights its genetic diversity and adaptability. In terms of biotic relationships, Pseudomonas putida is free-living and does not exhibit pathogenicity towards animals, indicating it does not cause disease in this context. This microbe has garnered interest for its potential applications in bioremediation, given its ability to metabolize a variety of organic pollutants in contaminated environments. The ecological role of Pseudomonas putida in soil and wastewater systems is significant, as it contributes to nutrient cycling and the degradation of harmful substances, thus playing a vital part in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4950 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorDI560_11635Not AvailableNegative2611799 - 261242823317.7
plp-dependent aminotransferase family proteinDI560_11640Not AvailablePositive2612519 - 261404855332.6
polyamine abc transporter substrate-binding proteinDI560_11645Not AvailableNegative2614078 - 261518140761.0
histone deacetylase family proteinDI560_11650Not AvailableNegative2615184 - 261622437706.2
arac family transcriptional regulatorDI560_11655Not AvailableNegative2616328 - 261732036628.0
aspartate ammonia-lyaseDI560_11660Not AvailableNegative2617502 - 261894151604.7
lysr family transcriptional regulatorDI560_11665Not AvailablePositive2619123 - 262004033435.5
hypothetical proteinDI560_11670Not AvailableNegative2620032 - 262065824035.6
5-(carboxyamino)imidazole ribonucleotide mutaseDI560_11675Not AvailablePositive2620930 - 262142116944.6
5-(carboxyamino)imidazole ribonucleotide synthaseDI560_11680Not AvailablePositive2621432 - 262251438665.4

Displaying genes 2301 – 2310 of 32944 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total