Pseudomonas putida

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida is a Gram-negative, rod-shaped bacterium that is motile due to the presence of true flagella. This organism is characterized by its single-cell arrangement and is known for its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. Pseudomonas putida is a heterotrophic microbe that primarily derives its energy from organic compounds, making it well-suited for its natural habitats, which include soil and wastewater. As a mesophilic organism, Pseudomonas putida grows optimally at moderate temperatures. It is nonsporulating and possesses two cellular membranes, a trait typical of Gram-negative bacteria. The genome of Pseudomonas putida is complex, comprising seven replicons, which highlights its genetic diversity and adaptability. In terms of biotic relationships, Pseudomonas putida is free-living and does not exhibit pathogenicity towards animals, indicating it does not cause disease in this context. This microbe has garnered interest for its potential applications in bioremediation, given its ability to metabolize a variety of organic pollutants in contaminated environments. The ecological role of Pseudomonas putida in soil and wastewater systems is significant, as it contributes to nutrient cycling and the degradation of harmful substances, thus playing a vital part in maintaining ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4950 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3',5'-cyclic-amp phosphodiesteraseDI560_05400Not AvailableNegative1240504 - 124132230391.2
duf1249 domain-containing proteinDI560_05405Not AvailableNegative1241393 - 124184517237.0
nudix domain-containing proteinDI560_05410Not AvailableNegative1241836 - 124245323238.6
duf3298 domain-containing proteinDI560_05415Not AvailablePositive1242638 - 124338427761.4
putative hydroxymethylpyrimidine transporter cytxDI560_05420Not AvailableNegative1243353 - 124463644710.7
phosphomethylpyrimidine synthase thicDI560_05425Not AvailableNegative1244783 - 124666969725.0
channel protein tolcDI560_05430Not AvailablePositive1247096 - 124853252715.4
3-deoxy-d-manno-octulosonic acid transferaseDI560_05435Not AvailableNegative1248604 - 124987546315.7
lysr family transcriptional regulatorDI560_05440Not AvailableNegative1249887 - 125077733625.4
qace family quaternary ammonium compound efflux smr transporterDI560_05445Not AvailablePositive1250865 - 125119711486.8

Displaying genes 1111 – 1120 of 32944 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total