Pseudomonas putida str. JBC17

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain JBC17 is a Gram-negative, rod-shaped bacterium that exists as single cells and is characterized as a nonsporulating, heterotrophic organism. This strain is facultatively anaerobic, allowing it to thrive in various environmental conditions, including the presence and absence of oxygen. P. putida JBC17 is commonly found in soil and wastewater habitats, reflecting its adaptability to nutrient-rich environments often impacted by organic waste. As a heterotroph, P. putida JBC17 utilizes organic compounds as its energy source, which enables it to play a significant role in the biogeochemical cycling of nutrients in its natural habitats. The ability to survive and flourish in both aerobic and anaerobic conditions suggests that this strain may possess metabolic versatility, allowing it to exploit a wide range of substrates in diverse ecological niches. The ecological significance of Pseudomonas putida JBC17 is underscored by its potential involvement in bioremediation processes, particularly in environments contaminated with organic pollutants. By degrading complex organic compounds, this strain contributes to soil health and wastewater treatment, highlighting its importance in environmental microbiology and sustainable practices. Further exploration of its metabolic pathways could provide insights into its functional roles in ecosystems affected by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainJBC17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. JBC17
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain JBC17 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent dihydropyrimidine dehydrogenase subunit preaDKY63_RS01810Not AvailableNegative382195 - 38346945948.9
nad(p)-dependent oxidoreductaseDKY63_RS01815Not AvailableNegative383470 - 38483749338.7
dihydropyrimidinaseDKY63_RS01820Not AvailableNegative384992 - 38643152452.1
ncs1 family nucleobase:cation symporter-1DKY63_RS01825Not AvailablePositive386974 - 38845853354.1
zn-dependent hydrolaseDKY63_RS01830Not AvailablePositive388599 - 38988245210.3
helix-turn-helix transcriptional regulatorDKY63_RS01835Not AvailablePositive390064 - 39155455268.2
duf1652 domain-containing proteinDKY63_RS01840Not AvailablePositive391736 - 3919879153.12
sdr family oxidoreductaseDKY63_RS01845Not AvailableNegative392427 - 39319426667.3
phosphotransferase family proteinDKY63_RS01850Not AvailableNegative393353 - 39442040708.6
2-hydroxyacid dehydrogenaseDKY63_RS01855Not AvailableNegative394564 - 39552933785.3

Displaying genes 551 – 560 of 6271 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total