Pseudomonas putida str. JBC17

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain JBC17 is a Gram-negative, rod-shaped bacterium that exists as single cells and is characterized as a nonsporulating, heterotrophic organism. This strain is facultatively anaerobic, allowing it to thrive in various environmental conditions, including the presence and absence of oxygen. P. putida JBC17 is commonly found in soil and wastewater habitats, reflecting its adaptability to nutrient-rich environments often impacted by organic waste. As a heterotroph, P. putida JBC17 utilizes organic compounds as its energy source, which enables it to play a significant role in the biogeochemical cycling of nutrients in its natural habitats. The ability to survive and flourish in both aerobic and anaerobic conditions suggests that this strain may possess metabolic versatility, allowing it to exploit a wide range of substrates in diverse ecological niches. The ecological significance of Pseudomonas putida JBC17 is underscored by its potential involvement in bioremediation processes, particularly in environments contaminated with organic pollutants. By degrading complex organic compounds, this strain contributes to soil health and wastewater treatment, highlighting its importance in environmental microbiology and sustainable practices. Further exploration of its metabolic pathways could provide insights into its functional roles in ecosystems affected by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainJBC17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. JBC17
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain JBC17 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bug family tripartite tricarboxylate transporter substrate binding proteinDKY63_RS26570Not AvailableNegative5670310 - 567128735169.4
response regulatorDKY63_RS26575Not AvailablePositive5671722 - 567239324582.9
sensor histidine kinaseDKY63_RS26580Not AvailablePositive5672386 - 567377450671.0
hdod domain-containing proteinDKY63_RS26585Not AvailableNegative5673889 - 567471030615.9
ygfz/gcvt domain-containing proteinDKY63_RS26590Not AvailableNegative5674760 - 567570133641.6
succinate dehydrogenase assembly factor 2DKY63_RS26595Not AvailablePositive5675851 - 567610510180.4
protein ygfxDKY63_RS26600Not AvailablePositive5676089 - 567654117286.3
l-aspartate oxidaseDKY63_RS26605Not AvailableNegative5676510 - 567812659539.8
rna polymerase sigma factor rpoeDKY63_RS26610Not AvailablePositive5678683 - 567926422252.3
sigma-e factor negative regulatory proteinDKY63_RS26615Not AvailablePositive5679296 - 567988320867.6

Displaying genes 5301 – 5310 of 6271 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total