Pseudomonas putida str. JBC17

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain JBC17 is a Gram-negative, rod-shaped bacterium that exists as single cells and is characterized as a nonsporulating, heterotrophic organism. This strain is facultatively anaerobic, allowing it to thrive in various environmental conditions, including the presence and absence of oxygen. P. putida JBC17 is commonly found in soil and wastewater habitats, reflecting its adaptability to nutrient-rich environments often impacted by organic waste. As a heterotroph, P. putida JBC17 utilizes organic compounds as its energy source, which enables it to play a significant role in the biogeochemical cycling of nutrients in its natural habitats. The ability to survive and flourish in both aerobic and anaerobic conditions suggests that this strain may possess metabolic versatility, allowing it to exploit a wide range of substrates in diverse ecological niches. The ecological significance of Pseudomonas putida JBC17 is underscored by its potential involvement in bioremediation processes, particularly in environments contaminated with organic pollutants. By degrading complex organic compounds, this strain contributes to soil health and wastewater treatment, highlighting its importance in environmental microbiology and sustainable practices. Further exploration of its metabolic pathways could provide insights into its functional roles in ecosystems affected by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainJBC17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. JBC17
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain JBC17 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ctp synthaseDKY63_RS25605Not AvailablePositive5478965 - 548059659615.5
3-deoxy-8-phosphooctulonate synthaseDKY63_RS25610Not AvailablePositive5480602 - 548144730785.5
phosphopyruvate hydrataseDKY63_RS25615Not AvailablePositive5481605 - 548289445530.1
cell division protein ftsbDKY63_RS25620Not AvailablePositive5483065 - 548334310468.7
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDKY63_RS25625Not AvailablePositive5483340 - 548404725789.7
lysr substrate-binding domain-containing proteinDKY63_RS25630Not AvailableNegative5484044 - 548494334061.0
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseDKY63_RS25635Not AvailablePositive5485051 - 548616339179.7
s-formylglutathione hydrolaseDKY63_RS25640Not AvailablePositive5486172 - 548702031278.1
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDKY63_RS25645Not AvailablePositive5487062 - 548753516722.3
trna pseudouridine(13) synthase trudDKY63_RS25650Not AvailablePositive5487532 - 548859038747.1

Displaying genes 5141 – 5150 of 6271 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total