Pseudomonas putida str. JBC17

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain JBC17 is a Gram-negative, rod-shaped bacterium that exists as single cells and is characterized as a nonsporulating, heterotrophic organism. This strain is facultatively anaerobic, allowing it to thrive in various environmental conditions, including the presence and absence of oxygen. P. putida JBC17 is commonly found in soil and wastewater habitats, reflecting its adaptability to nutrient-rich environments often impacted by organic waste. As a heterotroph, P. putida JBC17 utilizes organic compounds as its energy source, which enables it to play a significant role in the biogeochemical cycling of nutrients in its natural habitats. The ability to survive and flourish in both aerobic and anaerobic conditions suggests that this strain may possess metabolic versatility, allowing it to exploit a wide range of substrates in diverse ecological niches. The ecological significance of Pseudomonas putida JBC17 is underscored by its potential involvement in bioremediation processes, particularly in environments contaminated with organic pollutants. By degrading complex organic compounds, this strain contributes to soil health and wastewater treatment, highlighting its importance in environmental microbiology and sustainable practices. Further exploration of its metabolic pathways could provide insights into its functional roles in ecosystems affected by anthropogenic activities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainJBC17

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida str. JBC17
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain JBC17 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate-dependent phosphoribosylglycinamide formyltransferaseDKY63_RS24885Not AvailablePositive5314676 - 531585742331.9
sugar abc transporter atpaseDKY63_RS24895Not AvailablePositive5316036 - 531658420419.3
imp dehydrogenaseDKY63_RS24900Not AvailablePositive5316813 - 531828251876.7
glutamine-hydrolyzing gmp synthaseDKY63_RS24905Not AvailablePositive5318381 - 531995858174.1
membrane-targeted effector domain-containing toxinDKY63_RS24910Not AvailableNegative5320040 - 5323309120518.0
multicopper oxidase family proteinDKY63_RS24915Not AvailablePositive5323308 - 532468450567.6
trna adenosine(34) deaminase tadaDKY63_RS24920Not AvailablePositive5324684 - 532518117616.3
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobDKY63_RS24925Not AvailableNegative5325307 - 532626336282.5
carboxy-s-adenosyl-l-methionine synthase cmoaDKY63_RS24930Not AvailableNegative5326260 - 532700327561.2
lysoplasmalogenaseDKY63_RS24935Not AvailableNegative5327193 - 532782822586.7

Displaying genes 5001 – 5010 of 6271 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total