Pseudomonas fluorescens str. ICMP3636

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens str. ICMP3636 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain thrives optimally at a temperature of 25.0°C and relies on organic compounds as a heterotrophic energy source, indicating its adaptability to various environments. As an aerobic organism, P. fluorescens str. ICMP3636 requires oxygen for its metabolic processes and can be found in diverse habitats, reflecting its ecological versatility. This bacterium is known for its ability to survive in both soil and water environments, which may play a significant role in nutrient cycling and the biodegradation of organic pollutants. The presence of Pseudomonas fluorescens in multiple habitats underscores its potential as a beneficial microbe in bioremediation strategies, as it may contribute to the degradation of harmful substances in contaminated sites. The adaptability of this strain to different ecological niches highlights its significance in microbial ecology, particularly in the context of environmental health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens str. ICMP3636
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens str. ICMP3636

Accession NumberLKEI00000000.1

Gene Summary

Adenine Count

1305317 bp

Thymine Count

1269679 bp

Guanine Count

1975030 bp

Cytosine Count

2040913 bp

Genome Length

6591031 bp

Protein-coding Genes

5780 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Lytic enzymeAO066_18150Not Available-3315966 - 331665524436.0
Tail fiber proteinAO066_18155P03749-3317691 - 3320780111781.0
Tail assembly protein iAO066_18160O64334-3320840 - 332143921319.7
hypothetical proteinAO066_18165Not Available-3321494 - 332185012533.0
Tail proteinAO066_18170O64333-3321892 - 332266228506.4
Minor tail proteinAO066_18175Not Available-3322666 - 332334924866.4
hypothetical proteinAO066_18180Not Available-3323408 - 33236207654.97
Hypothetical proteinAO066_18185Not Available-3323598 - 332398714301.0
Minor tail protein mAO066_18190Not Available-3325195 - 332553312487.8
Tail tape measure proteinAO066_18195P85501-3325580 - 3328480103298.0

Displaying genes 1 – 10 of 5885 in total

Pathways

23 pathways

Metabolites

393 records
Metabolite IDMetabolite nameStructureCAS number
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 31–40 of 393 metabolites