Pseudomonas fluorescens str. ICMP3636

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens str. ICMP3636 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain thrives optimally at a temperature of 25.0°C and relies on organic compounds as a heterotrophic energy source, indicating its adaptability to various environments. As an aerobic organism, P. fluorescens str. ICMP3636 requires oxygen for its metabolic processes and can be found in diverse habitats, reflecting its ecological versatility. This bacterium is known for its ability to survive in both soil and water environments, which may play a significant role in nutrient cycling and the biodegradation of organic pollutants. The presence of Pseudomonas fluorescens in multiple habitats underscores its potential as a beneficial microbe in bioremediation strategies, as it may contribute to the degradation of harmful substances in contaminated sites. The adaptability of this strain to different ecological niches highlights its significance in microbial ecology, particularly in the context of environmental health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens str. ICMP3636
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens str. ICMP3636

Accession NumberLKEI00000000.1

Gene Summary

Adenine Count

1305317 bp

Thymine Count

1269679 bp

Guanine Count

1975030 bp

Cytosine Count

2040913 bp

Genome Length

6591031 bp

Protein-coding Genes

5780 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
homogentisate 1,2-dioxygenaseAO066_18705Q4KI35-3513 - 479647300.5
iclr family transcriptional regulatorAO066_18710Not Available+4917 - 569627532.2
penicillin-binding proteinAO066_18715P39844-5698 - 715551610.6
hypothetical proteinAO066_18720Not Available-7210 - 822036876.0
tonb-dependent receptorAO066_18725Not Available-8250 - 1066787147.7
glutathione s-transferaseAO066_18730Not Available-10777 - 1171233918.7
giy-yig nucleaseAO066_18735Q88P81-11788 - 120609820.9
ketosteroid isomeraseAO066_18740Not Available-12098 - 1256817671.7
hypothetical proteinAO066_18745Not Available-12665 - 1329722345.6
response regulator receiver proteinAO066_18750Q2YZ42-13530 - 1416222747.9

Displaying genes 61 – 70 of 5885 in total

Pathways

23 pathways

Metabolites

393 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 393 metabolites