Pseudomonas fluorescens str. ICMP3636

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens str. ICMP3636 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain thrives optimally at a temperature of 25.0°C and relies on organic compounds as a heterotrophic energy source, indicating its adaptability to various environments. As an aerobic organism, P. fluorescens str. ICMP3636 requires oxygen for its metabolic processes and can be found in diverse habitats, reflecting its ecological versatility. This bacterium is known for its ability to survive in both soil and water environments, which may play a significant role in nutrient cycling and the biodegradation of organic pollutants. The presence of Pseudomonas fluorescens in multiple habitats underscores its potential as a beneficial microbe in bioremediation strategies, as it may contribute to the degradation of harmful substances in contaminated sites. The adaptability of this strain to different ecological niches highlights its significance in microbial ecology, particularly in the context of environmental health and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainICMP3636

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens str. ICMP3636
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain ICMP3636 scaffold99, whole genome

Gene Summary

Adenine Count

1305317 bp

Thymine Count

1269679 bp

Guanine Count

1975030 bp

Cytosine Count

2040913 bp

Genome Length

6591031 bp

Protein-coding Genes

5780 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sn-glycerol-3-phosphate transporterAO066_22345Not AvailableNegative4633239 - 463372117616.9
ligand-gated channelAO066_22350Q05098Positive4634050 - 463643786037.3
calcium transporter chacAO066_22355Q5ZI66Positive4636464 - 463711724527.3
glycerol-3-phosphate transporterAO066_22360P08194Negative4637114 - 463845149466.5
nadph:quinone oxidoreductaseAO066_22365A7RK30Negative4638699 - 463967634146.2
flagellar basal body protein flilAO066_22370Not AvailablePositive4639827 - 464023414689.9
hypothetical proteinAO066_22375P0AGH1Negative4640362 - 464148040164.6
multidrug abc transporter atp-binding proteinAO066_22380P37624Negative4641480 - 464419798581.7
hemolysin secretion protein dAO066_22385P37626Negative4644194 - 464515934765.6
hypothetical proteinAO066_22390Q9P016Negative4645229 - 464567816692.1

Displaying genes 4121 – 4130 of 5885 in total

Metabolites

393 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 393 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total