Sphingobacterium thalpophilum

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium thalpophilum is a rod-shaped bacterium primarily found in activated sludge environments. This organism is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under specific ecological conditions. The genomic data associated with this species is accessible under the accession number NZ_LR590484.1, providing a resource for further genetic and functional studies. The presence of Sphingobacterium thalpophilum in activated sludge suggests its potential role in wastewater treatment processes, where it may contribute to the degradation of organic matter and the maintenance of microbial community dynamics. The unique adaptations of this bacterium to its habitat could provide insights into the mechanisms of microbial resilience and functionality in engineered ecosystems. Understanding the traits and behaviors of Sphingobacterium thalpophilum could enhance our knowledge of microbial contributions to bioremediation and nutrient cycling in activated sludge systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium thalpophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium thalpophilum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium thalpophilum strain NCTC11429 chromosome 1.

Gene Summary

Adenine Count

1686080 bp

Thymine Count

1674553 bp

Guanine Count

1305270 bp

Cytosine Count

1296990 bp

Genome Length

5962893 bp

Protein-coding Genes

4999 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar phosphate isomerase/epimerase family proteinFGL37_RS12355Not AvailableNegative2967127 - 296818840290.5
gluconate 2-dehydrogenase subunit 3 family proteinFGL37_RS12360Not AvailableNegative2968211 - 296878321293.7
gmc oxidoreductaseFGL37_RS12365Not AvailableNegative2968788 - 297046763088.8
arac family ligand binding domain-containing proteinFGL37_RS12370Not AvailablePositive2970701 - 297118918471.3
transposaseFGL37_RS12375Not AvailablePositive2971204 - 297148210805.0
is3 family transposaseFGL37_RS12380Not AvailablePositive2971479 - 297233033207.4
helix-turn-helix domain-containing proteinFGL37_RS12385Not AvailablePositive2972355 - 297277416116.5
hypothetical proteinFGL37_RS12390Not AvailableNegative2973366 - 297382417269.1
Tmrna,resume consensus sequence (at 89): tataactggcgaagaaaaNot AvailableNot AvailablePositive2974072 - 2974437Not Available
m3 family metallopeptidaseFGL37_RS12400Not AvailableNegative2974575 - 297660577374.6

Displaying genes 2501 – 2510 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.