Sphingobacterium thalpophilum

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium thalpophilum is a rod-shaped bacterium primarily found in activated sludge environments. This organism is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication under specific ecological conditions. The genomic data associated with this species is accessible under the accession number NZ_LR590484.1, providing a resource for further genetic and functional studies. The presence of Sphingobacterium thalpophilum in activated sludge suggests its potential role in wastewater treatment processes, where it may contribute to the degradation of organic matter and the maintenance of microbial community dynamics. The unique adaptations of this bacterium to its habitat could provide insights into the mechanisms of microbial resilience and functionality in engineered ecosystems. Understanding the traits and behaviors of Sphingobacterium thalpophilum could enhance our knowledge of microbial contributions to bioremediation and nutrient cycling in activated sludge systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium thalpophilum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium thalpophilum
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatactivated sludge
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium thalpophilum strain NCTC11429 chromosome 1.

Gene Summary

Adenine Count

1686080 bp

Thymine Count

1674553 bp

Guanine Count

1305270 bp

Cytosine Count

1296990 bp

Genome Length

5962893 bp

Protein-coding Genes

4999 genes

Non-Coding Genes

107 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaFGL37_RS10675Not AvailableNegative2580429 - 258120829573.6
4-hydroxythreonine-4-phosphate dehydrogenase pdxaFGL37_RS10680Not AvailablePositive2581372 - 258242738715.5
cca trna nucleotidyltransferaseFGL37_RS10685Not AvailablePositive2582482 - 258391554695.5
is1096 element passenger tnpr family proteinFGL37_RS10690Not AvailablePositive2583964 - 258454822851.8
trna (adenosine(37)-n6)-dimethylallyltransferase miaaFGL37_RS10695Not AvailablePositive2584596 - 258551334462.5
branched-chain amino acid aminotransferaseFGL37_RS10700Not AvailableNegative2585674 - 258674439983.2
hypothetical proteinFGL37_RS25365Not AvailablePositive2587066 - 25872246045.41
gh3 auxin-responsive promoter family proteinFGL37_RS10705Not AvailableNegative2587305 - 258881958734.6
lps export abc transporter atp-binding proteinFGL37_RS10710Not AvailableNegative2588844 - 258957827701.7
single-stranded-dna-specific exonuclease recjFGL37_RS10715Not AvailableNegative2589797 - 259149763583.6

Displaying genes 2161 – 2170 of 5106 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.