Helicobacter cinaedi

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cinaedi is a microbe that thrives in mesophilic environments, meaning it has a temperature preference category of 20-45°C. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, typically in the form of carbohydrates or proteins. H. cinaedi produces energy through the process of fermentation, a metabolic pathway that converts glucose into lactic acid. Its Gram stain classification is negative, which means it does not retain the crystal violet stain used in the Gram staining technique, resulting in a pink color. The microbe has a helical shape, characteristic of the genus Helicobacter, which is typically composed of spiral-shaped bacteria. H. cinaedi can be found in a variety of body sites, including the respiratory, gastrointestinal, and genitourinary tracts, as well as skin and soft tissue. Its ability to colonize multiple sites is likely due to its ability to adapt to different environments and exploit available nutrient sources. Oxygen preference for H. cinaedi is facultative anaerobic, meaning it can grow in the presence of oxygen but can also survive and thrive in low-oxygen environments. While H. cinaedi is not typically considered a major pathogen, it can cause disease in immunocompromised individuals, such as those with HIV/AIDS or undergoing chemotherapy. In these cases, the microbe can cause a range of symptoms, from mild skin lesions to severe systemic infections. Despite its relatively innocuous nature, H. cinaedi is an important member of the human microbiome, playing a role in maintaining the balance of the intestinal ecosystem. Its ability to colonize multiple sites and adapt to changing environments makes it a resilient and fascinating microbe.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cinaedi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cinaedi
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestinal resident; wastewater treatment plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cinaedi

Accession NumberUGHX00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1809 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinNCTC12219_00932Not Available-961271 - 96202028131.7
AttlNot AvailableNot Available+961836 - 961849Not Available
Hypothetical proteinNCTC12219_00933Not Available-962550 - 96299617353.0
uncharacterised proteinNCTC12219_00934Not Available-962993 - 9631937455.17
Hypothetical proteinNCTC12219_00935Not Available-963193 - 96370519539.5
uncharacterised proteinNCTC12219_00936Not Available-963706 - 96408013581.9
Hypothetical proteinNCTC12219_00937Not Available-964550 - 96491512905.6
Putative sensor proteinNCTC12219_00938Not Available-965119 - 96629743093.9
Putative histidine kinaseNCTC12219_00939Not Available-966474 - 96707322811.4
uncharacterised proteinNCTC12219_00940Not Available+967140 - 9674009617.2

Displaying genes 1 – 10 of 1902 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019198PS(18:0/18:1(9Z))C42H80NO10PChemical structure of PS(18:0/18:1(9Z))NULL
Average790.073Da
Monoisotopic789.551984778Da
BASm0019212PS(16:0/18:1(9Z))C40H76NO10PChemical structure of PS(16:0/18:1(9Z))NULL
Average762.019Da
Monoisotopic761.520684649Da
BASm0019214PS(16:1(9Z)/18:1(9Z))C40H74NO10PChemical structure of PS(16:1(9Z)/18:1(9Z))NULL
Average760.003Da
Monoisotopic759.505034585Da
BASm0020025myristoyl-CoAC35H62N7O17P3SChemical structure of myristoyl-CoA3130-72-1
Average977.89Da
Monoisotopic977.313573819Da
BASm0020027oleoyl-CoAC39H68N7O17P3SChemical structure of oleoyl-CoA1716-06-9
Average1031.98Da
Monoisotopic1031.360524011Da
BASm0020161PA(12:0/16:0)C31H61O8PChemical structure of PA(12:0/16:0)NULL
Average592.785Da
Monoisotopic592.41040544Da
BASm0020162PA(12:0/16:1(9Z))C31H59O8PChemical structure of PA(12:0/16:1(9Z))NULL
Average590.7691Da
Monoisotopic590.394755376Da
BASm0020164PA(14:1(9Z)/16:0)C33H63O8PChemical structure of PA(14:1(9Z)/16:0)NULL
Average618.8223Da
Monoisotopic618.426055504Da
BASm0020166PA(16:1(9Z)/18:1(9Z))C37H69O8PChemical structure of PA(16:1(9Z)/18:1(9Z))NULL
Average672.9127Da
Monoisotopic672.473005696Da
BASm0020169PA(18:0/18:1(9Z))C39H75O8PChemical structure of PA(18:0/18:1(9Z))384833-24-3
Average702.9818Da
Monoisotopic702.519955888Da

Displaying 61–70 of 88 metabolites