Helicobacter cinaedi

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter cinaedi is a microbe that thrives in mesophilic environments, meaning it has a temperature preference category of 20-45°C. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, typically in the form of carbohydrates or proteins. H. cinaedi produces energy through the process of fermentation, a metabolic pathway that converts glucose into lactic acid. Its Gram stain classification is negative, which means it does not retain the crystal violet stain used in the Gram staining technique, resulting in a pink color. The microbe has a helical shape, characteristic of the genus Helicobacter, which is typically composed of spiral-shaped bacteria. H. cinaedi can be found in a variety of body sites, including the respiratory, gastrointestinal, and genitourinary tracts, as well as skin and soft tissue. Its ability to colonize multiple sites is likely due to its ability to adapt to different environments and exploit available nutrient sources. Oxygen preference for H. cinaedi is facultative anaerobic, meaning it can grow in the presence of oxygen but can also survive and thrive in low-oxygen environments. While H. cinaedi is not typically considered a major pathogen, it can cause disease in immunocompromised individuals, such as those with HIV/AIDS or undergoing chemotherapy. In these cases, the microbe can cause a range of symptoms, from mild skin lesions to severe systemic infections. Despite its relatively innocuous nature, H. cinaedi is an important member of the human microbiome, playing a role in maintaining the balance of the intestinal ecosystem. Its ability to colonize multiple sites and adapt to changing environments makes it a resilient and fascinating microbe.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter cinaedi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter cinaedi
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestinal resident; wastewater treatment plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter cinaedi

Accession NumberUGHX00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1809 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinNCTC12219_00932Not Available-961271 - 96202028131.7
AttlNot AvailableNot Available+961836 - 961849Not Available
Hypothetical proteinNCTC12219_00933Not Available-962550 - 96299617353.0
uncharacterised proteinNCTC12219_00934Not Available-962993 - 9631937455.17
Hypothetical proteinNCTC12219_00935Not Available-963193 - 96370519539.5
uncharacterised proteinNCTC12219_00936Not Available-963706 - 96408013581.9
Hypothetical proteinNCTC12219_00937Not Available-964550 - 96491512905.6
Putative sensor proteinNCTC12219_00938Not Available-965119 - 96629743093.9
Putative histidine kinaseNCTC12219_00939Not Available-966474 - 96707322811.4
uncharacterised proteinNCTC12219_00940Not Available+967140 - 9674009617.2

Displaying genes 1 – 10 of 1902 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017691PS(14:0/18:1(11Z))C38H72NO10PChemical structure of PS(14:0/18:1(11Z))NULL
Average733.965Da
Monoisotopic733.48938452Da
BASm0017737PG(14:1(7Z)/14:1(7Z))C34H63O10PChemical structure of PG(14:1(7Z)/14:1(7Z))NULL
Average662.842Da
Monoisotopic662.415885227Da
BASm0017743Stearoyl-CoAC39H70N7O17P3SChemical structure of Stearoyl-CoA362-66-3
Average1033.996Da
Monoisotopic1033.376174075Da
BASm0017775PE(12:0/14:0)C31H62NO8PChemical structure of PE(12:0/14:0)NULL
Average607.81Da
Monoisotopic607.421304958Da
BASm0017777PE(12:0/16:0)C33H66NO8PChemical structure of PE(12:0/16:0)NULL
Average635.864Da
Monoisotopic635.452605087Da
BASm0017778PE(12:0/16:1(9Z))C33H64NO8PChemical structure of PE(12:0/16:1(9Z))NULL
Average633.848Da
Monoisotopic633.436955023Da
BASm0017781PE(12:0/18:1(11Z))C35H68NO8PChemical structure of PE(12:0/18:1(11Z))NULL
Average661.902Da
Monoisotopic661.468255152Da
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da

Displaying 21–30 of 88 metabolites