Helicobacter pylori str. ZH42

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH42 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape and occurrence as single cells. This strain thrives at an optimal temperature of 37.0°C, indicating its adaptation to the human body, where it is commonly found in association with gastric tissues. As a member of the Helicobacter genus, H. pylori str. ZH42 occupies a unique ecological niche within the host's gastric environment, where it interacts with the gastric mucosa and may influence local microbiota dynamics. The microaerophilic nature of this strain suggests that it requires reduced oxygen levels for optimal growth, which aligns with its habitat in the stomach, where oxygen concentration is lower than in the external environment. The unique traits of H. pylori str. ZH42 not only facilitate its survival in the harsh gastric environment but may also play a role in the broader ecological interactions within the host's gastrointestinal microbiome. Understanding its specific adaptations and interactions could provide insights into the complex relationships between host and microbe in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH42

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH42 164, whole genome shotgun

Gene Summary

Adenine Count

498959 bp

Thymine Count

495966 bp

Guanine Count

319966 bp

Cytosine Count

317716 bp

Genome Length

1644695 bp

Protein-coding Genes

1570 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeECC40_08280Not AvailablePositive1607141 - 16073798888.84
molecular chaperone dnakECC40_08285Not AvailablePositive1607411 - 160793819044.0
molecular chaperone dnakECC40_08290Not AvailableNegative1607939 - 160846619044.0
nucleotide exchange factor grpeECC40_08295Not AvailableNegative1608497 - 16087358865.8
hypothetical proteinECC40_08300Not AvailablePositive1608945 - 160953121632.6
hypothetical proteinECC40_08305Not AvailablePositive1609741 - 161032721772.8
agmatine deiminaseECC40_08310Not AvailableNegative1610328 - 161079217396.1
site-specific dna-methyltransferaseECC40_08315Not AvailableNegative1610851 - 16111179911.19
rna degradosome polyphosphate kinaseECC40_08320Not AvailablePositive1611118 - 161188929475.2
rna degradosome polyphosphate kinaseECC40_08325Not AvailableNegative1611890 - 161266129493.2

Displaying genes 1571 – 1580 of 1611 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total