Helicobacter pylori str. ZH39

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH39 is a Gram-negative bacterium characterized by its spiral shape and solitary cell arrangement. This microbe thrives optimally at a temperature of 37.0°C and exhibits a microaerophilic oxygen requirement, indicating its adaptation to environments with reduced oxygen concentrations, such as the gastric mucosa of its host. H. pylori is well-known for its association with the human gastric environment, where it establishes a niche that allows it to persist despite the harsh acidic conditions. The microbe's spiral morphology is thought to enhance its motility, facilitating penetration into the protective mucous layer of the stomach lining. The habitat of H. pylori str. ZH39 is primarily host-associated, reinforcing its symbiotic relationship with humans and potentially influencing the host's gastric health. This strain, like other H. pylori strains, may contribute to the complex dynamics of the gastric microbiome, suggesting that its presence could play a role in modulating local immune responses or influencing the overall microbial composition in the stomach. Overall, the unique adaptations of H. pylori str. ZH39 to its microaerophilic environment and its ability to thrive at physiological temperatures highlight its evolutionary success as a resident of the human gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH39

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH39 31, whole genome shotgun sequence.

Gene Summary

Adenine Count

496405 bp

Thymine Count

501991 bp

Guanine Count

315821 bp

Cytosine Count

318927 bp

Genome Length

1635446 bp

Protein-coding Genes

1452 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetone carboxylase subunit alphaECC37_03865Not AvailableNegative788671 - 79096886504.6
hydantoinase/oxoprolinase family proteinECC37_03870Not AvailableNegative790980 - 79312178498.2
lipid a deacylase lpxr family proteinECC37_03875Not AvailableNegative793368 - 79436938548.1
tigr00366 family proteinECC37_03880Not AvailableNegative794494 - 79585849177.4
coa transferase subunit bECC37_03885Not AvailableNegative795877 - 79650022201.2
coa transferase subunit aECC37_03890Not AvailableNegative796497 - 79719525414.8
acetyl-coa c-acetyltransferaseECC37_03895Not AvailableNegative797206 - 79838141139.9
3'-5' exonucleaseECC37_03900Not AvailableNegative798662 - 79947431496.5
ferrous iron transport protein bECC37_03905Not AvailablePositive799618 - 80154671368.7
ligand-gated channelECC37_03910Not AvailablePositive801798 - 80410187508.6

Displaying genes 751 – 760 of 1516 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total