Helicobacter pylori str. ZH39

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH39 is a Gram-negative bacterium characterized by its spiral shape and solitary cell arrangement. This microbe thrives optimally at a temperature of 37.0°C and exhibits a microaerophilic oxygen requirement, indicating its adaptation to environments with reduced oxygen concentrations, such as the gastric mucosa of its host. H. pylori is well-known for its association with the human gastric environment, where it establishes a niche that allows it to persist despite the harsh acidic conditions. The microbe's spiral morphology is thought to enhance its motility, facilitating penetration into the protective mucous layer of the stomach lining. The habitat of H. pylori str. ZH39 is primarily host-associated, reinforcing its symbiotic relationship with humans and potentially influencing the host's gastric health. This strain, like other H. pylori strains, may contribute to the complex dynamics of the gastric microbiome, suggesting that its presence could play a role in modulating local immune responses or influencing the overall microbial composition in the stomach. Overall, the unique adaptations of H. pylori str. ZH39 to its microaerophilic environment and its ability to thrive at physiological temperatures highlight its evolutionary success as a resident of the human gastrointestinal tract.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH39

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH39 31, whole genome shotgun sequence.

Gene Summary

Adenine Count

496405 bp

Thymine Count

501991 bp

Guanine Count

315821 bp

Cytosine Count

318927 bp

Genome Length

1635446 bp

Protein-coding Genes

1452 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf465 domain-containing proteinECC37_07540Not AvailablePositive1529613 - 15298439090.72
hypothetical proteinECC37_07545Not AvailableNegative1529900 - 153019911828.2
outer membrane beta-barrel proteinECC37_07550Not AvailableNegative1530806 - 15309836830.28
nickel transporterECC37_07555Not AvailableNegative1531433 - 15316699528.42
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaECC37_07560Not AvailablePositive1531921 - 153273630502.5
ribonuclease jECC37_07565Not AvailablePositive1532774 - 153484977544.8
kpsf/gutq family sugar-phosphate isomeraseECC37_07570Not AvailablePositive1534833 - 153582235913.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnECC37_07575Not AvailablePositive1535819 - 153689240773.1
hypothetical proteinECC37_07580Not AvailablePositive1537100 - 15373217559.55
hypothetical proteinECC37_07590Not AvailableNegative1538582 - 153920223422.4

Displaying genes 1441 – 1450 of 1516 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total