Helicobacter pylori str. ZH109

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH109 is a Gram-negative bacterium characterized by its spirilla shape and solitary cell arrangement. This microbe thrives optimally at 37.0°C, which aligns with the average human body temperature, indicating its adaptation to a host-associated habitat. H. pylori str. ZH109 exhibits microaerophilic oxygen requirements, suggesting that it prefers environments with reduced oxygen levels, a trait that is consistent with its colonization of the gastric mucosa where oxygen concentration is lower than in the external environment. As a member of the Helicobacter genus, this strain is known for its unique physiology that allows it to navigate the acidic conditions of the stomach. The presence of this bacterium in the host can lead to various interactions with the gastric microenvironment, influencing local pH and potentially interacting with the host's immune responses. The ecological role of H. pylori str. ZH109 may extend beyond mere survival, potentially participating in the complex microbial dynamics of the gastrointestinal tract. Understanding the specific traits of this strain can provide insights into its ecological niche and its interactions within the host, contributing to the broader understanding of microbial communities in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH109

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH109 63, whole genome shotgun

Gene Summary

Adenine Count

486229 bp

Thymine Count

481045 bp

Guanine Count

312771 bp

Cytosine Count

305680 bp

Genome Length

1590121 bp

Protein-coding Genes

1455 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf874 family proteinEC561_00005Not AvailablePositive1 - 812884.42
16s ribosomal rnaNot AvailableNot AvailablePositive520 - 2028Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive810 - 3698Not Available
radical sam proteinEC561_00010Not AvailableNegative220 - 115534691.6
type i dna topoisomeraseEC561_00015Not AvailableNegative1148 - 335883325.4
flagellin bEC561_00020Not AvailablePositive3524 - 506853915.3
5s ribosomal rnaNot AvailableNot AvailablePositive3932 - 4049Not Available
duf115 domain-containing proteinEC561_00025Not AvailablePositive5128 - 701472332.7
hypothetical proteinEC561_00030Not AvailableNegative7025 - 732110877.2
hypothetical proteinEC561_00035Not AvailableNegative7342 - 798024886.7

Displaying genes 1 – 10 of 1497 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gastric cancerCausesPMC10756867
GcCausesPMC12053057
GastritisCausesPMC12250555
Peptic ulcer diseaseCausesPMC12250555
Gastric cancerCausesPMC12745834
Gasteric ulcersCausesPMC2653234
Asymptomatic mucosal inflammatory responseCausesPMC3207844
Gastric carcinomaCausesPMC3208570
GastritisCausesPMC3250449
HypochlorhydriaCausesPMC3250449

Displaying health effects 11 – 20 of 94 in total