Helicobacter pylori str. ZH109

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH109 is a Gram-negative bacterium characterized by its spirilla shape and solitary cell arrangement. This microbe thrives optimally at 37.0°C, which aligns with the average human body temperature, indicating its adaptation to a host-associated habitat. H. pylori str. ZH109 exhibits microaerophilic oxygen requirements, suggesting that it prefers environments with reduced oxygen levels, a trait that is consistent with its colonization of the gastric mucosa where oxygen concentration is lower than in the external environment. As a member of the Helicobacter genus, this strain is known for its unique physiology that allows it to navigate the acidic conditions of the stomach. The presence of this bacterium in the host can lead to various interactions with the gastric microenvironment, influencing local pH and potentially interacting with the host's immune responses. The ecological role of H. pylori str. ZH109 may extend beyond mere survival, potentially participating in the complex microbial dynamics of the gastrointestinal tract. Understanding the specific traits of this strain can provide insights into its ecological niche and its interactions within the host, contributing to the broader understanding of microbial communities in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH109

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH109 63, whole genome shotgun

Gene Summary

Adenine Count

486229 bp

Thymine Count

481045 bp

Guanine Count

312771 bp

Cytosine Count

305680 bp

Genome Length

1590121 bp

Protein-coding Genes

1455 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
di-trans,poly-cis-decaprenylcistransferaseEC561_04985Not AvailablePositive991873 - 99257727454.1
abc transporter atp-binding proteinEC561_04990Not AvailablePositive992571 - 99325725395.2
hypothetical proteinEC561_04995Not AvailableNegative993259 - 9934507604.27
phosphoribosylamine--glycine ligaseEC561_05000Not AvailablePositive993570 - 99484447371.1
rdd family proteinEC561_05005Not AvailablePositive994886 - 99536518743.7
lps-assembly protein lptdEC561_05010Not AvailablePositive995368 - 99762987925.6
phosphoribosyltransferaseEC561_05015Not AvailablePositive997638 - 99834826916.3
polyribonucleotide nucleotidyltransferaseEC561_05020Not AvailablePositive998351 - 100041776999.4
atp synthase subunit cEC561_05025Not AvailablePositive1000550 - 100086710658.5
Trna-leuNot AvailableNot AvailablePositive1000942 - 1001028Not Available

Displaying genes 951 – 960 of 1497 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total