Helicobacter pylori str. ZH109

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH109 is a Gram-negative bacterium characterized by its spirilla shape and solitary cell arrangement. This microbe thrives optimally at 37.0°C, which aligns with the average human body temperature, indicating its adaptation to a host-associated habitat. H. pylori str. ZH109 exhibits microaerophilic oxygen requirements, suggesting that it prefers environments with reduced oxygen levels, a trait that is consistent with its colonization of the gastric mucosa where oxygen concentration is lower than in the external environment. As a member of the Helicobacter genus, this strain is known for its unique physiology that allows it to navigate the acidic conditions of the stomach. The presence of this bacterium in the host can lead to various interactions with the gastric microenvironment, influencing local pH and potentially interacting with the host's immune responses. The ecological role of H. pylori str. ZH109 may extend beyond mere survival, potentially participating in the complex microbial dynamics of the gastrointestinal tract. Understanding the specific traits of this strain can provide insights into its ecological niche and its interactions within the host, contributing to the broader understanding of microbial communities in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH109

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH109
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH109 63, whole genome shotgun

Gene Summary

Adenine Count

486229 bp

Thymine Count

481045 bp

Guanine Count

312771 bp

Cytosine Count

305680 bp

Genome Length

1590121 bp

Protein-coding Genes

1455 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid transporterEC561_07590Not AvailablePositive1527291 - 152792323209.6
dna polymerase iii subunit gamma/tauEC561_07595Not AvailablePositive1527992 - 152974666744.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeEC561_07600Not AvailablePositive1529743 - 153014415027.5
lps export abc transporter atp-binding proteinEC561_07605Not AvailablePositive1530157 - 153087926443.1
rna polymerase factor sigma-54EC561_07610Not AvailablePositive1530882 - 153212648203.2
hd family hydrolaseEC561_07615Not AvailableNegative1532238 - 153345847222.1
4-oxalocrotonate tautomerase family proteinEC561_07620Not AvailableNegative1533706 - 15339127570.1
recombination protein recrEC561_07625Not AvailablePositive1534075 - 153465621984.4
trna pseudouridine(13) synthase trudEC561_07630Not AvailablePositive1534653 - 153579843957.1
zinc metalloprotease htpxEC561_07635Not AvailablePositive1535737 - 153671737355.4

Displaying genes 1441 – 1450 of 1497 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total