Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Helicobacter pylori str. 29CaP
Accession NumberNZ_CP012905.1
Gene Summary
Adenine Count
491352 bp
Thymine Count
499248 bp
Guanine Count
311836 bp
Cytosine Count
321991 bp
Genome Length
1624441 bp
Protein-coding Genes
1511 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system yafq family toxin | APV63_RS00600 | Not Available | - | 125160 - 125339 | 6925.45 |
| duf874 family protein | APV63_RS08215 | Not Available | - | 125354 - 126592 | 47744.7 |
| duf3944 domain-containing protein | APV63_RS08515 | Not Available | - | 126596 - 126907 | 11902.9 |
| duf874 family protein | APV63_RS08370 | Not Available | - | 126864 - 127118 | 9192.12 |
| pyruvate, water dikinase | APV63_RS00610 | P56070 | - | 127225 - 129663 | 91210.4 |
| threonine--trna ligase | APV63_RS00620 | Q1CV33 | + | 130020 - 131858 | 70333.9 |
| translation initiation factor if-3 | APV63_RS00625 | P55973 | + | 131855 - 132466 | 23274.2 |
| 50s ribosomal protein l35 | APV63_RS00630 | B6JPM4 | + | 132447 - 132641 | 7260.16 |
| 50s ribosomal protein l20 | APV63_RS00635 | B6JPM5 | + | 132736 - 133086 | 14074.5 |
| outer membrane protein | APV63_RS00640 | Not Available | + | 133287 - 134147 | 31826.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Clavulanic acid Action Pathway
Clavulanic acid Action Pathway
Amoxicillin Action Pathway
Amoxicillin Action Pathway
Pixantrone Action Pathway
Pixantrone Action Pathway
