Helicobacter pylori str. ZH3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH3 is a Gram-negative bacterium characterized by its spiral shape and single-cell arrangement. This microbe thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to host-associated environments. H. pylori ZH3 is microaerophilic, indicating that it requires reduced levels of oxygen for survival, a trait that is crucial for its colonization in the gastric mucosa of its hosts. The unique morphological and physiological traits of H. pylori ZH3 suggest its specialization in gastric habitats, where it may play a role in the complex microbiota of the gastrointestinal tract. Its spirilla shape may facilitate motility in the viscous gastric environment, allowing it to navigate through mucus layers and adhere to the gastric epithelium. The microaerophilic requirement highlights its adaptation to the low-oxygen conditions often present in the stomach, further underscoring its niche specialization. Understanding the traits of H. pylori ZH3 not only contributes to the knowledge of its biology but also provides insights into the intricate relationships this microbe may have with its host and the potential implications for gastrointestinal health. The strain exemplifies the capacity of certain bacteria to thrive in specific microenvironments, showcasing the complexity of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH3 28, whole genome shotgun sequence.

Gene Summary

Adenine Count

472863 bp

Thymine Count

476330 bp

Guanine Count

306878 bp

Cytosine Count

300677 bp

Genome Length

1558792 bp

Protein-coding Genes

1402 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate ferredoxin oxidoreductaseECB90_06810Not AvailablePositive1378437 - 137938134971.9
adenylosuccinate lyaseECB90_06815Not AvailablePositive1379491 - 138081349917.4
outer membrane proteinECB90_06820Not AvailablePositive1380878 - 138171131881.8
excinuclease abc subunit bECB90_06825Not AvailableNegative1381708 - 138368475990.7
carboxylating nicotinate-nucleotide diphosphorylaseECB90_06835Not AvailableNegative1387010 - 138783130793.5
quinolinate synthase nadaECB90_06840Not AvailableNegative1387831 - 138884137832.7
phosphatidylserine decarboxylaseECB90_06845Not AvailableNegative1388831 - 138963430242.5
helix-turn-helix domain-containing proteinECB90_06850Not AvailableNegative1389628 - 139013419777.9
hypothetical proteinECB90_06855Not AvailableNegative1390147 - 139069821338.2
4-hydroxybenzoate polyprenyltransferaseECB90_06860Not AvailableNegative1390634 - 139151832845.1

Displaying genes 1291 – 1300 of 1444 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total