Helicobacter pylori str. ZH3

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH3 is a Gram-negative bacterium characterized by its spiral shape and single-cell arrangement. This microbe thrives optimally at a temperature of 37.0°C, which aligns with its adaptation to host-associated environments. H. pylori ZH3 is microaerophilic, indicating that it requires reduced levels of oxygen for survival, a trait that is crucial for its colonization in the gastric mucosa of its hosts. The unique morphological and physiological traits of H. pylori ZH3 suggest its specialization in gastric habitats, where it may play a role in the complex microbiota of the gastrointestinal tract. Its spirilla shape may facilitate motility in the viscous gastric environment, allowing it to navigate through mucus layers and adhere to the gastric epithelium. The microaerophilic requirement highlights its adaptation to the low-oxygen conditions often present in the stomach, further underscoring its niche specialization. Understanding the traits of H. pylori ZH3 not only contributes to the knowledge of its biology but also provides insights into the intricate relationships this microbe may have with its host and the potential implications for gastrointestinal health. The strain exemplifies the capacity of certain bacteria to thrive in specific microenvironments, showcasing the complexity of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH3

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH3 28, whole genome shotgun sequence.

Gene Summary

Adenine Count

472863 bp

Thymine Count

476330 bp

Guanine Count

306878 bp

Cytosine Count

300677 bp

Genome Length

1558792 bp

Protein-coding Genes

1402 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemk family protein methyltransferaseECB90_06385Not AvailableNegative1291673 - 129250331401.4
m48 family peptidaseECB90_06390Not AvailableNegative1292500 - 129372346254.5
hypothetical proteinECB90_06395Not AvailablePositive1293903 - 129442719944.7
spor domain-containing proteinECB90_06400Not AvailableNegative1294467 - 129521328682.2
duf904 domain-containing proteinECB90_06405Not AvailablePositive1295413 - 12956438591.27
hypothetical proteinECB90_06410Not AvailablePositive1295656 - 12958929297.04
primosomal protein n'ECB90_06415Not AvailablePositive1295877 - 129773670480.4
carboxy-s-adenosyl-l-methionine synthase cmoaECB90_06420Not AvailableNegative1297769 - 129850028551.0
superoxide dismutaseECB90_06425Not AvailableNegative1298554 - 129919524518.8
thiol peroxidaseECB90_06430Not AvailablePositive1299419 - 129991918312.4

Displaying genes 1211 – 1220 of 1444 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total