Helicobacter pylori str. ZH139

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH139 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at 37.0°C, which aligns with the typical human body temperature, suggesting its adaptation to a host-associated habitat. H. pylori is predominantly found in the gastric mucosa of humans and is known for its ability to survive in the acidic environment of the stomach, which is critical for its ecological niche. The microaerophilic nature of H. pylori indicates that it requires reduced levels of oxygen for growth, which is indicative of its specialized adaptation to the gastric environment where oxygen levels are lower than in the atmosphere. The unique morphology of H. pylori, with its spiral shape, facilitates motility through the viscous gastric mucus, enhancing its ability to colonize and establish itself within the gastric epithelium. Understanding the specific traits of Helicobacter pylori str. ZH139 contributes to the broader knowledge of microbial life in human-associated environments, highlighting the intricate adaptations that enable survival in such a challenging habitat. Further exploration of this strain may provide insights into the complex interactions between host and microbe, as well as the potential for influencing gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH139

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH139
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH139 40, whole genome shotgun

Gene Summary

Adenine Count

507122 bp

Thymine Count

504076 bp

Guanine Count

327593 bp

Cytosine Count

313540 bp

Genome Length

1655117 bp

Protein-coding Genes

1492 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acid-activated urea channelEDC13_01245Not AvailableNegative255571 - 25615821664.6
urease subunit betaEDC13_01250Not AvailableNegative256352 - 25806161687.2
urease subunit alphaEDC13_01255Not AvailableNegative258065 - 25878126541.1
Trna-valNot AvailableNot AvailablePositive259030 - 259105Not Available
lipoprotein signal peptidaseEDC13_01265Not AvailableNegative259123 - 25959617932.5
phosphoglucosamine mutaseEDC13_01270Not AvailableNegative259590 - 26092749128.4
30s ribosomal protein s20EDC13_01275Not AvailablePositive261017 - 26128610210.7
peptide chain release factor 1EDC13_01280Not AvailablePositive261410 - 26246839589.2
outer membrane proteinEDC13_01290Not AvailablePositive262879 - 26364628351.3
dentin sialophosphopreproproteinEDC13_01295Not AvailablePositive263897 - 26566665625.9

Displaying genes 241 – 250 of 1534 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total