Helicobacter pylori str. ZH139

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ZH139 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at 37.0°C, which aligns with the typical human body temperature, suggesting its adaptation to a host-associated habitat. H. pylori is predominantly found in the gastric mucosa of humans and is known for its ability to survive in the acidic environment of the stomach, which is critical for its ecological niche. The microaerophilic nature of H. pylori indicates that it requires reduced levels of oxygen for growth, which is indicative of its specialized adaptation to the gastric environment where oxygen levels are lower than in the atmosphere. The unique morphology of H. pylori, with its spiral shape, facilitates motility through the viscous gastric mucus, enhancing its ability to colonize and establish itself within the gastric epithelium. Understanding the specific traits of Helicobacter pylori str. ZH139 contributes to the broader knowledge of microbial life in human-associated environments, highlighting the intricate adaptations that enable survival in such a challenging habitat. Further exploration of this strain may provide insights into the complex interactions between host and microbe, as well as the potential for influencing gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH139

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH139
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH139 40, whole genome shotgun

Gene Summary

Adenine Count

507122 bp

Thymine Count

504076 bp

Guanine Count

327593 bp

Cytosine Count

313540 bp

Genome Length

1655117 bp

Protein-coding Genes

1492 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbonic anhydraseEDC13_00875Not AvailableNegative183847 - 18451225580.6
orotidine-5'-phosphate decarboxylaseEDC13_00880Not AvailablePositive184635 - 18531825368.2
pantoate--beta-alanine ligaseEDC13_00885Not AvailablePositive185319 - 18614930960.8
Trna-gluNot AvailableNot AvailablePositive186163 - 186238Not Available
Trna-aspNot AvailableNot AvailablePositive186305 - 186381Not Available
Trna-valNot AvailableNot AvailablePositive186432 - 186507Not Available
Trna-gluNot AvailableNot AvailablePositive186548 - 186622Not Available
Trna-lysNot AvailableNot AvailablePositive186633 - 186708Not Available
outer membrane proteinEDC13_00915Not AvailableNegative187437 - 18954276451.1
chaperonin groelEDC13_00920Not AvailableNegative189866 - 19150658226.5

Displaying genes 171 – 180 of 1534 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total