Helicobacter pylori str. ZH125

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH125 is a Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This microbe thrives in a microaerophilic environment, indicating a preference for reduced oxygen levels, which aligns with its typical habitat associated with the human stomach. The optimal growth temperature for H. pylori ZH125 is approximately 37.0°C, a condition that corresponds to the normal human body temperature, further emphasizing its adaptation to a host-associated lifestyle. H. pylori strains are known for their role in colonizing the gastric mucosa, and strain ZH125 is no exception, potentially contributing to the complex dynamics of the gastric microbiome. Its microaerophilic nature suggests a specialized metabolic adaptation that enables it to survive and proliferate in the acidic and low-oxygen conditions of the stomach. This adaptation may provide insights into its ecological niche, as the bacteria may utilize specific metabolic pathways that differ from those of other gastric microorganisms. Overall, the characteristics of H. pylori ZH125 underline its specialized adaptations to a host-associated environment, illustrating the intricate relationships between microbial life and human physiology in the gastric ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH125

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH125
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH125 25, whole genome shotgun

Gene Summary

Adenine Count

485636 bp

Thymine Count

486381 bp

Guanine Count

313439 bp

Cytosine Count

307247 bp

Genome Length

1594439 bp

Protein-coding Genes

1423 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoacyl-trna hydrolaseEC591_00295Not AvailablePositive56757 - 5731720908.3
yjgp/yjgq family permeaseEC591_00300Not AvailablePositive57372 - 5843941252.2
outer membrane proteinEC591_00310Not AvailableNegative59792 - 6095842979.1
copper resistance protein copdEC591_00315Not AvailablePositive61137 - 6157416222.0
heavy metal translocating p-type atpaseEC591_00320Not AvailableNegative61571 - 6393786870.6
trna1(val) (adenine(37)-n6)-methyltransferaseEC591_00325Not AvailableNegative63962 - 6467826689.5
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductaseEC591_00330Not AvailableNegative64660 - 6569439074.6
sodium/glutamate symporterEC591_00335Not AvailableNegative65691 - 6691743954.2
saccharopine dehydrogenase family proteinEC591_00340Not AvailablePositive67003 - 6820245152.5
cytochrome c oxidase accessory protein ccogEC591_00345Not AvailableNegative68212 - 6958852674.0

Displaying genes 61 – 70 of 1465 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total