Helicobacter pylori str. ZH116

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH116 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, suggesting an adaptation to the warm environment of its host. H. pylori is typically associated with the gastric mucosa of humans and other mammals, indicating that ZH116 is likely to inhabit similar host-associated environments. As a microaerophilic organism, H. pylori strain ZH116 requires reduced levels of oxygen for growth, which is consistent with its ecological niche in the stomach, where oxygen concentration is lower than in the atmosphere. This adaptation may play a crucial role in its survival and persistence within the acidic gastric environment. The specific metabolic pathways and interactions of H. pylori strain ZH116 within its host remain to be fully characterized, but its unique morphological and physiological traits may influence its ecological dynamics in the host's microbiome. The ability to thrive in such a specific microenvironment underscores the significance of H. pylori in the context of host-microbe interactions, potentially impacting gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH116

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH116 44, whole genome shotgun

Gene Summary

Adenine Count

479271 bp

Thymine Count

485454 bp

Guanine Count

303383 bp

Cytosine Count

312597 bp

Genome Length

1583771 bp

Protein-coding Genes

1443 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l9EC573_06665Not AvailablePositive1336309 - 133676116625.4
atp-dependent protease subunit hslvEC573_06670Not AvailablePositive1336765 - 133730719827.0
hslu--hslv peptidase atpase subunitEC573_06675Not AvailablePositive1337307 - 133863850080.8
gtpase eraEC573_06680Not AvailablePositive1338635 - 133954334627.5
peptidaseEC573_06685Not AvailablePositive1339540 - 134053238550.2
sel1 repeat family proteinEC573_06690Not AvailableNegative1340616 - 134147032534.6
cag pathogenicity island protein cag1EC573_06695Not AvailablePositive1341641 - 134198812360.8
cag pathogenicity island proteinEC573_06700Not AvailablePositive1342096 - 134246113798.0
type iv secretion system apparatus protein cag3EC573_06705Not AvailablePositive1342461 - 134390655015.7
sodium:calcium antiporterEC573_06710Not AvailablePositive1343916 - 134442519586.9

Displaying genes 1271 – 1280 of 1485 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total