Helicobacter pylori str. ZH116

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH116 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, suggesting an adaptation to the warm environment of its host. H. pylori is typically associated with the gastric mucosa of humans and other mammals, indicating that ZH116 is likely to inhabit similar host-associated environments. As a microaerophilic organism, H. pylori strain ZH116 requires reduced levels of oxygen for growth, which is consistent with its ecological niche in the stomach, where oxygen concentration is lower than in the atmosphere. This adaptation may play a crucial role in its survival and persistence within the acidic gastric environment. The specific metabolic pathways and interactions of H. pylori strain ZH116 within its host remain to be fully characterized, but its unique morphological and physiological traits may influence its ecological dynamics in the host's microbiome. The ability to thrive in such a specific microenvironment underscores the significance of H. pylori in the context of host-microbe interactions, potentially impacting gastric health and disease outcomes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH116

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH116
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH116 44, whole genome shotgun

Gene Summary

Adenine Count

479271 bp

Thymine Count

485454 bp

Guanine Count

303383 bp

Cytosine Count

312597 bp

Genome Length

1583771 bp

Protein-coding Genes

1443 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-argNot AvailableNot AvailablePositive1106586 - 1106662Not Available
molecular chaperone dnakEC573_05545Not AvailablePositive1106784 - 11069275572.04
mechanosensitive ion channel family proteinEC573_05550Not AvailablePositive1107269 - 110914071507.1
class i sam-dependent methyltransferaseEC573_05555Not AvailableNegative1109143 - 111031245451.7
methionine--trna ligaseEC573_05560Not AvailablePositive1110482 - 111246475751.4
ferrochelataseEC573_05565Not AvailablePositive1112465 - 111348439117.9
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobEC573_05570Not AvailablePositive1113488 - 111427330058.8
paai family thioesteraseEC573_05575Not AvailablePositive1114288 - 111471616097.5
glycosyltransferase family 4 proteinEC573_05580Not AvailablePositive1114721 - 111589044982.6
arginine decarboxylaseEC573_05585Not AvailablePositive1115904 - 111775170276.2

Displaying genes 1061 – 1070 of 1485 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total