Helicobacter pylori str. ZH113

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain ZH113 is a Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This microbe exhibits optimal growth at a temperature of 37.0°C, suggesting a physiological adaptation to the human body, where it is typically found in a host-associated habitat. As a microaerophilic organism, H. pylori str. ZH113 requires reduced oxygen levels for growth, which aligns with its ecological niche within the gastric environment, where oxygen concentration is lower than in the atmosphere. The unique morphology and specific environmental requirements of H. pylori strain ZH113 may influence its interaction with the host's immune system and its ability to colonize the gastric mucosa. Understanding these traits is crucial for elucidating the bacterium's role in gastric health and disease. The microaerophilic nature of this strain may also inform strategies for targeted treatments that consider the oxygen levels within the gastric niche.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainZH113

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ZH113
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ZH113 25, whole genome shotgun

Gene Summary

Adenine Count

483954 bp

Thymine Count

492150 bp

Guanine Count

310344 bp

Cytosine Count

311651 bp

Genome Length

1599835 bp

Protein-coding Genes

1439 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane beta-barrel proteinEC570_02810Not AvailablePositive569368 - 57030935620.9
m23 family metallopeptidaseEC570_02815Not AvailablePositive570373 - 57164148433.2
septum site-determining protein mincEC570_02820Not AvailablePositive571578 - 57223125214.7
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseEC570_02825Not AvailablePositive572228 - 57311532573.9
trna threonylcarbamoyladenosine biosynthesis protein tsabEC570_02830Not AvailablePositive573188 - 57361016064.2
homoserine kinaseEC570_02835Not AvailablePositive573664 - 57454532664.9
duf448 domain-containing proteinEC570_02840Not AvailablePositive574517 - 57478610378.1
translation initiation factor if-2EC570_02845Not AvailablePositive574783 - 577623105602.0
30s ribosome-binding factor rbfaEC570_02850Not AvailablePositive577623 - 57795812467.0
ribosome maturation factor rimpEC570_02855Not AvailablePositive577951 - 57839116612.1

Displaying genes 541 – 550 of 1481 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total