Capnocytophaga ochracea

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and tendency to form chains or exist as single cells. This organism inhabits diverse environments, indicating its capacity to adapt to various ecological niches. Its microaerophilic nature suggests that it thrives in environments with low oxygen levels, which could influence its interactions with other microbial communities and its role in biogeochemical cycles. The unique morphology of C. ochracea, along with its cell arrangement, may play a role in its ecological functions, potentially affecting nutrient cycling and microbial dynamics in its habitats. The ability to form chains could facilitate nutrient exchange and communication between cells, enhancing its survival and adaptability in microaerophilic conditions. This trait might also influence its interactions with other microorganisms, including potential symbiotic relationships or competition for resources. Overall, the adaptability of Capnocytophaga ochracea to varying habitats and its specific oxygen requirements provide insights into the ecological roles of microaerophilic bacteria in diverse environments. Understanding these traits can contribute to broader discussions on microbial ecology and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Capnocytophaga ochracea strain NCTC11458 genome assembly, contig:

Gene Summary

Adenine Count

817662 bp

Thymine Count

815114 bp

Guanine Count

533704 bp

Cytosine Count

528210 bp

Genome Length

2694690 bp

Protein-coding Genes

2269 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine--trna ligaseNCTC11458_01610Not AvailableNegative1853658 - 185520859997.4
uncharacterised proteinNCTC11458_01611Not AvailablePositive1855353 - 18554784788.7
dna utilization protein gntxNCTC11458_01612Not AvailablePositive1855755 - 185644426097.9
uncharacterised proteinNCTC11458_01613Not AvailablePositive1856496 - 185679810927.3
gliding motility-associated lipoprotein glddNCTC11458_01614Not AvailablePositive1856880 - 185744621516.9
gatb/yqey family proteinNCTC11458_01615Not AvailablePositive1857516 - 185796516063.8
Trna-argNot AvailableNot AvailablePositive1857985 - 1858059Not Available
uncharacterised proteinNCTC11458_01617Not AvailableNegative1858144 - 185854515252.0
ycfa-like proteinNCTC11458_01618Not AvailableNegative1858555 - 18587437097.62
aldehyde dehydrogenase aNCTC11458_01619Not AvailableNegative1858941 - 186051559082.4

Displaying genes 1611 – 1620 of 2334 in total

Metabolites

348 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 348 metabolites

Health Effects

Health ConditionRelationReference
Bacterial enteritisCausesPMC4108124
Acute bacterial enteritisCausesPMC4108124

Displaying health effects 1 – 2 of 2 in total