Campylobacter coli str. OR12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli str. OR12 is a Gram-negative bacterium characterized by its microaerophilic nature, which necessitates a low-oxygen environment for optimal growth. This species is part of the Campylobacter genus, which is known for its distinctive spiral shape and motility, facilitated by a single polar flagellum. The microaerophilic requirement generally indicates that C. coli str. OR12 thrives in environments where oxygen levels are lower than atmospheric concentration, such as the gastrointestinal tracts of various animals. As a member of the Campylobacter family, this strain may play a role in the complex microbial communities present in animal intestines, contributing to the overall gut microbiota dynamics. Its adaptation to microaerophilic conditions suggests a specialization for environments rich in organic matter and nutrient availability, which are often encountered in anaerobic habitats. Furthermore, the traits of C. coli str. OR12 may provide insights into its potential interactions with host organisms and its ecological niche, highlighting the importance of microaerophilic bacteria in nutrient cycling and gut health. Ultimately, the specific metabolic pathways utilized by C. coli str. OR12 in low-oxygen conditions could provide valuable information regarding its ecological role, particularly in relation to its interactions with other gut microbiota and its contributions to the host's digestive processes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
StrainOR12

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli str. OR12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli strain OR12 plasmid pOR12TET, complete

Gene Summary

Adenine Count

11085 bp

Thymine Count

9310 bp

Guanine Count

4046 bp

Cytosine Count

3540 bp

Genome Length

27981 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinATE51_RS02030Not AvailableNegative409325 - 40989421924.5
vacj family lipoproteinATE51_RS02035Not AvailableNegative409904 - 41060226405.5
phosphoribosyltransferaseATE51_RS02040Not AvailableNegative410643 - 41108617096.8
ncs2 family permeaseATE51_RS02045Not AvailableNegative411104 - 41242347446.4
aminofutalosine synthase mqneATE51_RS02050Not AvailableNegative412433 - 41349741185.6
nucleotidyltransferaseATE51_RS02055Not AvailablePositive413640 - 41598891427.5
glutamine--fructose-6-phosphate transaminase (isomerizing)ATE51_RS02060Not AvailablePositive415992 - 41778867176.0
class ii fumarate hydrataseATE51_RS02065Not AvailablePositive417923 - 41931450683.2
ai-2e family transporterATE51_RS02070Not AvailableNegative419361 - 42040438484.9
holliday junction branch migration dna helicase ruvbATE51_RS02075Not AvailableNegative420414 - 42142437590.2

Displaying genes 561 – 570 of 2304 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Intestinal campylobacteriosisCausesPMC10942002
CampylobacteriosisCausesPMC11434686
Diarrheal diseasesCausesPMC11434686
EnteritisCausesPMC13255289
Bloodstream infectionsCausesPMC13255289
Urinary tract infectionsCausesPMC13255289
Bacterial enteritisCausesPMC4108124
Acute bacterial enteritisCausesPMC4108124
Enteric diseaseCausesPMC9565744
CampylobacteriosisCausesPMC9565744

Displaying health effects 1 – 10 of 12 in total