Campylobacter coli str. OR12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli str. OR12 is a Gram-negative bacterium characterized by its microaerophilic nature, which necessitates a low-oxygen environment for optimal growth. This species is part of the Campylobacter genus, which is known for its distinctive spiral shape and motility, facilitated by a single polar flagellum. The microaerophilic requirement generally indicates that C. coli str. OR12 thrives in environments where oxygen levels are lower than atmospheric concentration, such as the gastrointestinal tracts of various animals. As a member of the Campylobacter family, this strain may play a role in the complex microbial communities present in animal intestines, contributing to the overall gut microbiota dynamics. Its adaptation to microaerophilic conditions suggests a specialization for environments rich in organic matter and nutrient availability, which are often encountered in anaerobic habitats. Furthermore, the traits of C. coli str. OR12 may provide insights into its potential interactions with host organisms and its ecological niche, highlighting the importance of microaerophilic bacteria in nutrient cycling and gut health. Ultimately, the specific metabolic pathways utilized by C. coli str. OR12 in low-oxygen conditions could provide valuable information regarding its ecological role, particularly in relation to its interactions with other gut microbiota and its contributions to the host's digestive processes.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
StrainOR12

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli str. OR12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli strain OR12 plasmid pOR12TET, complete

Gene Summary

Adenine Count

11085 bp

Thymine Count

9310 bp

Guanine Count

4046 bp

Cytosine Count

3540 bp

Genome Length

27981 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine--trna ligaseATE51_RS05075Not AvailableNegative1002671 - 100405353349.6
murein biosynthesis integral membrane protein murjATE51_RS05080Not AvailableNegative1004053 - 100550454135.0
flagellar assembly protein aATE51_RS05085Not AvailablePositive1005608 - 100747372373.2
holliday junction branch migration protein ruvaATE51_RS05090Not AvailablePositive1007449 - 100800019893.4
d-alanine--d-alanine ligaseATE51_RS05095Not AvailablePositive1008010 - 100905039940.2
type ii toxin-antitoxin system phd/yefm family antitoxinATE51_RS05100Not AvailablePositive1009110 - 10093258369.35
alpha/beta fold hydrolaseATE51_RS05105Not AvailablePositive1009327 - 101005827933.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseATE51_RS05110Not AvailablePositive1010052 - 101147955260.9
acyl-[acp]--phospholipid o-acyltransferaseATE51_RS05115Not AvailablePositive1011628 - 1015137129768.0
aec family transporterATE51_RS05120Not AvailableNegative1015216 - 101612732758.1

Displaying genes 1171 – 1180 of 2304 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

Health ConditionRelationReference
Intestinal campylobacteriosisCausesPMC10942002
CampylobacteriosisCausesPMC11434686
Diarrheal diseasesCausesPMC11434686
EnteritisCausesPMC13255289
Bloodstream infectionsCausesPMC13255289
Urinary tract infectionsCausesPMC13255289
Bacterial enteritisCausesPMC4108124
Acute bacterial enteritisCausesPMC4108124
Enteric diseaseCausesPMC9565744
CampylobacteriosisCausesPMC9565744

Displaying health effects 1 – 10 of 12 in total