Hyphomicrobium sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Hyphomicrobium

Description

Hyphomicrobium sp. is a microbe characterized by the presence of true flagella, enabling motility, and is found in the open waters of the Atlantic Ocean. This organism exhibits a unique genomic structure, possessing four replicons, which may contribute to its adaptability in aquatic environments. The genome of Hyphomicrobium sp. is documented in multiple accessions, indicating a potentially complex genetic architecture that is important for its survival and function in marine ecosystems. The presence of true flagella suggests that Hyphomicrobium sp. may have a significant role in nutrient cycling and microbial interactions within its habitat. Its adaptation to the open Atlantic waters points to a specialization for life in a dynamic aquatic environment, where it may engage in processes such as organic matter decomposition or symbiotic relationships with other marine organisms. Understanding the functional capabilities of Hyphomicrobium sp. could provide insights into the ecological roles of microbes in oceanic systems, particularly in relation to biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusHyphomicrobium
SpeciesHyphomicrobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomicrobium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatopen Atlantic waters
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hyphomicrobium sp. isolate FW.3.32 FD_1039417_891, whole

Gene Summary

Adenine Count

652058 bp

Thymine Count

653678 bp

Guanine Count

1086424 bp

Cytosine Count

1084872 bp

Genome Length

3477032 bp

Protein-coding Genes

3033 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCTY28_05575Not AvailableNegative1229992 - 123122743311.7
trna dihydrouridine synthase dusbCTY28_05580Not AvailablePositive1231376 - 123238035346.6
two-component sensor histidine kinaseCTY28_05585Not AvailablePositive1232377 - 123352541959.7
nitrogen regulation protein nr(i)CTY28_05590Not AvailablePositive1233531 - 123497653320.5
pas domain-containing sensor histidine kinaseCTY28_05595Not AvailablePositive1235223 - 123754483893.4
sigma-54-dependent fis family transcriptional regulatorCTY28_05600Not AvailablePositive1237567 - 123896151582.1
trk system potassium transporter trkaCTY28_05605Not AvailablePositive1239089 - 124046549745.0
d-amino acid aminotransferaseCTY28_05610Not AvailablePositive1240490 - 124135031264.8
rna chaperone hfqCTY28_05615Not AvailablePositive1241543 - 12417919131.18
gtpase hflxCTY28_05620Not AvailablePositive1241850 - 124322650108.2

Displaying genes 7031 – 7040 of 13000 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.